RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 SRSF1Q07955 248 aaKnown RBP eCLIP16.52■□□□□ 0.23
USP25-202ENST00000285681 ZNF407Q9C0G0 2248 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 EXOC3-AS1Q8N2X6 119 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 MGST2Q99735 147 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 DTX2Q86UW9 622 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 NXT2Q9NPJ8 142 aaKnown RBP16.51■□□□□ 0.23
USP25-202ENST00000285681 CYSLTR1Q9Y271 337 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 CREBBPQ92793 2442 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 FAM223BA6NKX1 122 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 NDUFA3O95167 84 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 FAM223AQ8IWN6 122 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 TSKUQ8WUA8 353 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 TNFSF13O75888 250 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 NDPQ00604 133 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 PRSS33Q8NF86 280 aa16.51■□□□□ 0.23
USP25-202ENST00000285681 SMIM13P0DJ93 91 aa16.5■□□□□ 0.23
USP25-202ENST00000285681 MGAMO43451 1857 aa16.5■□□□□ 0.23
USP25-202ENST00000285681 PRB4P10163 310 aaPredicted RBP16.5■□□□□ 0.23
USP25-202ENST00000285681 PIP4P1Q86T03 277 aa16.5■□□□□ 0.23
USP25-202ENST00000285681 LINC00205P59089 165 aa16.5■□□□□ 0.23
USP25-202ENST00000285681 SEPSECSQ9HD40 501 aaKnown RBP16.5■□□□□ 0.23
USP25-202ENST00000285681 RNF114Q9Y508 228 aa16.5■□□□□ 0.23
USP25-202ENST00000285681 SRSF3P84103 164 aaKnown RBP16.49■□□□□ 0.23
USP25-202ENST00000285681 COTL1Q14019 142 aa16.49■□□□□ 0.23
USP25-202ENST00000285681 JKAMPQ9P055 326 aa16.49■□□□□ 0.23
USP25-202ENST00000285681 CHCHD5Q9BSY4 110 aa16.49■□□□□ 0.23
USP25-202ENST00000285681 UBE2E1P51965 193 aa16.49■□□□□ 0.23
USP25-202ENST00000285681 ORMDL2Q53FV1 153 aa16.49■□□□□ 0.23
USP25-202ENST00000285681 PHF3Q92576 2039 aaKnown RBP16.48■□□□□ 0.23
USP25-202ENST00000285681 J3QKU1 62 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 SERF1AO75920 110 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 CRPP02741 224 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 C14orf144Q96I85 54 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 IGKV3D-20A0A0C4DH25 116 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 ZNF138P52744 262 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 KIAA2026Q5HYC2 2103 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 PCNX1Q96RV3 2341 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 SRRM4A7MD48 611 aaKnown RBP16.48■□□□□ 0.23
USP25-202ENST00000285681 ITGB1BP1O14713 200 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 SNAI2O43623 268 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 HBDP02042 147 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 PRDM13Q9H4Q3 707 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 DMRT1Q9Y5R6 373 aa16.48■□□□□ 0.23
USP25-202ENST00000285681 IGKV1-16P04430 117 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 GATA4P43694 442 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 GFI1BQ5VTD9 330 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 ATRAIDQ6UW56 229 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 MRPL16Q9NX20 251 aaKnown RBP16.47■□□□□ 0.23
USP25-202ENST00000285681 DEFB121Q5J5C9 76 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 RPP25LQ8N5L8 163 aaKnown RBP16.47■□□□□ 0.23
USP25-202ENST00000285681 BEND2Q8NDZ0 799 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 Q8TCH9 128 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 TMEM170AQ8WVE7 144 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 RCHY1Q96PM5 261 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 AGMATQ9BSE5 352 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 CA1P00915 261 aaPredicted RBP16.47■□□□□ 0.23
USP25-202ENST00000285681 TCRAP04437 139 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 NUDT10Q8NFP7 164 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 RNF166Q96A37 237 aaPredicted RBP16.47■□□□□ 0.23
USP25-202ENST00000285681 NUDT11Q96G61 164 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 PEF1Q9UBV8 284 aaKnown RBP16.47■□□□□ 0.23
USP25-202ENST00000285681 TTC28Q96AY4 2481 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 TICRRQ7Z2Z1 1910 aa16.47■□□□□ 0.23
USP25-202ENST00000285681 ADMP35318 185 aa16.46■□□□□ 0.23
USP25-202ENST00000285681 ACTL10Q5JWF8 245 aa16.46■□□□□ 0.23
USP25-202ENST00000285681 RUSC1-AS1Q66K80 236 aa16.46■□□□□ 0.23
USP25-202ENST00000285681 RHPN1-AS1Q9BWJ2 59 aa16.46■□□□□ 0.23
USP25-202ENST00000285681 C3orf56Q8N813 242 aa16.46■□□□□ 0.23
USP25-202ENST00000285681 SRSF8Q9BRL6 282 aaKnown RBP16.46■□□□□ 0.23
USP25-202ENST00000285681 FCN3O75636 299 aa16.46■□□□□ 0.23
USP25-202ENST00000285681 MPDZO75970 2070 aa16.46■□□□□ 0.23
USP25-202ENST00000285681 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.46■□□□□ 0.236e-30■■■■■ 110
USP25-202ENST00000285681 TRAV1-1A0A0B4J248 108 aa16.46■□□□□ 0.22
USP25-202ENST00000285681 NTF4P34130 210 aa16.46■□□□□ 0.22
USP25-202ENST00000285681 MAPK1IP1LQ8NDC0 245 aa16.46■□□□□ 0.22
USP25-202ENST00000285681 HS3ST6Q96QI5 342 aa16.46■□□□□ 0.22
USP25-202ENST00000285681 PRADC1Q9BSG0 188 aa16.46■□□□□ 0.22
USP25-202ENST00000285681 NRN1Q9NPD7 142 aa16.46■□□□□ 0.22
USP25-202ENST00000285681 ZNF415Q09FC8 603 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 LINC00614P0C842 121 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 RNASE2P10153 161 aaKnown RBP16.45■□□□□ 0.22
USP25-202ENST00000285681 OR9G4Q8NGQ1 327 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 LINC00477Q96M19 166 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 CD28P10747 220 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 EVI2AP22794 236 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 CTAG1AP78358 180 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 C1QL4Q86Z23 238 aa16.45■□□□□ 0.22
USP25-202ENST00000285681 RPL35AP18077 110 aaKnown RBP16.45■□□□□ 0.22
USP25-202ENST00000285681 TRBV7-9A0A0J9YWB2 115 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 ZNF562Q6V9R5 426 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 ATP5L2Q7Z4Y8 100 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 ST6GALNAC6Q969X2 333 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 GNB1LQ9BYB4 327 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 TOMM40O96008 361 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 CYTL1Q9NRR1 136 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 C15orf62A8K5M9 175 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 Q96MF0 132 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 C1QTNF4Q9BXJ3 329 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 OVOL3O00110 214 aa16.44■□□□□ 0.22
USP25-202ENST00000285681 LMO1P25800 156 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms