RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 HOXA4Q00056 320 aaPredicted RBP8.51□□□□□ -1.05
ERCC3-201ENST00000285398 SHISA2Q6UWI4 295 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 Q6ZR03 302 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 LINC00173Q6ZV60 143 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 LINC01560Q8TB33 94 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 TMEM186Q96B77 213 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 SLC25A33Q9BSK2 321 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 MRPL32Q9BYC8 188 aaKnown RBP8.51□□□□□ -1.05
ERCC3-201ENST00000285398 FAM234AQ9H0X4 552 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 SOX21Q9Y651 276 aaPredicted RBP8.51□□□□□ -1.05
ERCC3-201ENST00000285398 CACNA1DQ01668 2161 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 POLQO75417 2590 aa8.51□□□□□ -1.05
ERCC3-201ENST00000285398 TET2Q6N021 2002 aaPredicted RBP8.51□□□□□ -1.05
ERCC3-201ENST00000285398 K7EP34 96 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 PROP1O75360 226 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 MPV17P39210 176 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 SAMD13Q5VXD3 122 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 NEGR1Q7Z3B1 354 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 OR13A1Q8NGR1 328 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 LINC00479Q96M42 142 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 FOXA2Q9Y261 457 aaPredicted RBP8.5□□□□□ -1.05
ERCC3-201ENST00000285398 UBR5O95071 2799 aaPredicted RBP8.5□□□□□ -1.05
ERCC3-201ENST00000285398 A4D1N5 150 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 SMIM17P0DL12 118 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 FOXA3P55318 350 aaPredicted RBP8.5□□□□□ -1.05
ERCC3-201ENST00000285398 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
ERCC3-201ENST00000285398 MSMPQ1L6U9 139 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 TIMM23BQ5SRD1 257 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 C2orf91Q6ZV80 131 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 C1orf162Q8NEQ5 155 aaPredicted RBP8.5□□□□□ -1.05
ERCC3-201ENST00000285398 WNT9BO14905 357 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 THBDP07204 575 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 GNG12Q9UBI6 72 aa8.5□□□□□ -1.05
ERCC3-201ENST00000285398 USP9YO00507 2555 aaPredicted RBP8.49□□□□□ -1.05
ERCC3-201ENST00000285398 C15orf65H3BRN8 121 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 PEX7O00628 323 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 ASPHD1Q5U4P2 390 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 OR5A1Q8NGJ0 315 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 OR2K2Q8NGT1 345 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 TMEM14BQ9NUH8 114 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 JKAMPQ9P055 326 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 FASNP49327 2511 aaKnown RBP8.49□□□□□ -1.05
ERCC3-201ENST00000285398 IQCF6A8MYZ5 107 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 IGLV1-44P01699 117 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 LGALS7P47929 136 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 LTC4SQ16873 150 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 TPRX1Q8N7U7 411 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 OR1N2Q8NGR9 330 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 OR10AG1Q8NH19 301 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 KLF14Q8TD94 323 aaPredicted RBP8.49□□□□□ -1.05
ERCC3-201ENST00000285398 NDFIP1Q9BT67 221 aa8.49□□□□□ -1.05
ERCC3-201ENST00000285398 ABCA12Q86UK0 2595 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 VWC2LB2RUY7 222 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 H0Y8G0 127 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 ACP7Q6ZNF0 438 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 ZC2HC1AQ96GY0 325 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 JPT1Q9UK76 154 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 A8MWL6 223 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 H3BUT2 72 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 TFF1P04155 84 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 CEACAM3P40198 252 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 ATP5IP56385 69 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-201ENST00000285398 ZNF826PQ6ZT77 177 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 C11orf53Q8IXP5 236 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 DPF1Q92782 380 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 HINT2Q9BX68 163 aa8.48□□□□□ -1.05
ERCC3-201ENST00000285398 IGKV1OR2-108A0A075B7D4 117 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 A0A0G2JLM5 398 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
ERCC3-201ENST00000285398 PLP1P60201 277 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 BSPH1Q075Z2 132 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 RPL39P5Q59GN2 51 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 CT83Q5H943 113 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 ZNF329Q86UD4 541 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 VSTM2AQ8TAG5 236 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 LRRC29Q8WV35 223 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 SLC25A2Q9BXI2 301 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 CD40P25942 277 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 FAM90A1Q86YD7 464 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 FAM167A-AS1Q96KT0 104 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 RPP21Q9H633 154 aaKnown RBP8.47□□□□□ -1.05
ERCC3-201ENST00000285398 OBP2BQ9NPH6 170 aa8.47□□□□□ -1.05
ERCC3-201ENST00000285398 CHEK1O14757 476 aa8.46□□□□□ -1.05
ERCC3-201ENST00000285398 ZCCHC24Q8N2G6 241 aaKnown RBP8.46□□□□□ -1.05
ERCC3-201ENST00000285398 PLPPR2Q96GM1 343 aa8.46□□□□□ -1.05
ERCC3-201ENST00000285398 JMJD8Q96S16 334 aa8.46□□□□□ -1.05
ERCC3-201ENST00000285398 DCTN5Q9BTE1 182 aa8.46□□□□□ -1.05
ERCC3-201ENST00000285398 MCRIP2Q9BUT9 160 aaKnown RBP8.46□□□□□ -1.05
ERCC3-201ENST00000285398 C7orf69Q9H7B7 122 aa8.46□□□□□ -1.05
ERCC3-201ENST00000285398 PTPN13Q12923 2485 aa8.46□□□□□ -1.05
ERCC3-201ENST00000285398 ZNF843Q8N446 348 aa8.46□□□□□ -1.06
ERCC3-201ENST00000285398 DDB2Q92466 427 aa8.46□□□□□ -1.06
ERCC3-201ENST00000285398 PAXXQ9BUH6 204 aa8.46□□□□□ -1.06
ERCC3-201ENST00000285398 NPFFR1Q9GZQ6 430 aa8.46□□□□□ -1.06
ERCC3-201ENST00000285398 PRNDQ9UKY0 176 aa8.46□□□□□ -1.06
ERCC3-201ENST00000285398 MED13LQ71F56 2210 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms