RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NDUFA4L2Q9NRX3 87 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 TNFRSF19Q9NS68 423 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 TRAV34A0A0B4J273 112 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 COX7A2P2O60397 106 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 COX7A1P24310 79 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 UBE2G1P62253 170 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 PPIAL4CA0A0B4J2A2 164 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 C22orf46C9J442 243 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 TOMM40O96008 361 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 PPIAL4GP0DN37 164 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 BPIFB3P59826 476 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 C10orf113Q5VZT2 155 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 EBLN2Q6P2I7 272 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 OR10W1Q8NGF6 305 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 E7EUB6 86 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 APOA2P02652 100 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 MAJINQ3KP22 176 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 FAM162BQ5T6X4 162 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 OR2T6Q8NHC8 308 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 UBTD1Q9HAC8 227 aa14.64□□□□□ -0.07
PDLIM3-201ENST00000284767 PTTG1IPP53801 180 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 ZNF596Q8TC21 504 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 IGFBPL1Q8WX77 278 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 FLYWCH2Q96CP2 140 aaKnown RBP14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 SMIM12Q96EX1 92 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 COX11Q9Y6N1 276 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 C2orf70A6NJV1 201 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 PYYP10082 97 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 HINT1P49773 126 aaPredicted RBP14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 RNASEKQ6P5S7 137 aaKnown RBP14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 LINC00311Q8N616 119 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 ZNF738Q8NE65 137 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 TMEM186Q96B77 213 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 C7orf69Q9H7B7 122 aa14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 ZNF430Q9H8G1 570 aaPredicted RBP14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 UTP20O75691 2785 aaKnown RBP14.63□□□□□ -0.07
PDLIM3-201ENST00000284767 NAV3Q8IVL0 2385 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 A0A1W2PN81 502 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 HIGD1CA8MV81 97 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 RPL8P62917 257 aaKnown RBP14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 Q56UQ5 140 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 C10orf55Q5SWW7 151 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 TPSG1Q9NRR2 321 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 ONECUT1Q9UBC0 465 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 A0A1B0GXF2 115 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 CCL25O15444 150 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 FXYD5Q96DB9 178 aa14.62□□□□□ -0.07
PDLIM3-201ENST00000284767 USP9XQ93008 2570 aaPredicted RBP14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 TCRBV4S1A1TA0A5B7 111 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 UBE2V1Q13404 147 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 LEMD1Q68G75 181 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 ENSAO43768 121 aaKnown RBP14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 IGLL1P15814 213 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 MYCNOSP40205 109 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 PCP4P48539 62 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 ASPHD1Q5U4P2 390 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 DTX2Q86UW9 622 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 OR2D3Q8NGH3 330 aa14.61□□□□□ -0.07
PDLIM3-201ENST00000284767 WNK2Q9Y3S1 2297 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 ARF6P62330 175 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 TMEM177Q53S58 311 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 PRR27Q6MZM9 219 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 PATE2Q6UY27 113 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 OR4F17Q8NGA8 305 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 IGLC7A0M8Q6 106 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 FSTL3O95633 263 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 IGLV1-47P01700 117 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 IGLV2-23P01705 113 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 C8orf31Q8N9H6 132 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 THAP8Q8NA92 274 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 OR4C13Q8NGP0 309 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 OR4A5Q8NH83 315 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 TMEM70Q9BUB7 260 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 SSBP4Q9BWG4 385 aaPredicted RBP14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 C1RLQ9NZP8 487 aa14.6□□□□□ -0.07
PDLIM3-201ENST00000284767 SLC25A17O43808 307 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 CNTFRP26992 372 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 GPR6P46095 362 aaPredicted RBP14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 CAMPP49913 170 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 ZNF137PP52743 207 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 SSBP2P81877 361 aaPredicted RBP14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 UNQ5815/PRO19632Q6UWF5 114 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 STXBP6Q8NFX7 210 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 TIMD4Q96H15 378 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 WASHC3Q9Y3C0 194 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 SUB1P53999 127 aaKnown RBP eCLIP14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 LDLRAD2Q5SZI1 272 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 KLF12Q9Y4X4 402 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 SOX21Q9Y651 276 aaPredicted RBP14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 MYO18BQ8IUG5 2567 aa14.59□□□□□ -0.07
PDLIM3-201ENST00000284767 CRXO43186 299 aaPredicted RBP14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 HBBP68871 147 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 PDPNQ86YL7 162 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 TMEM167AQ8TBQ9 72 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 NEU4Q8WWR8 484 aaPredicted RBP14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 EPDR1Q9UM22 224 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 CRYBG3Q68DQ2 2970 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 IGKV1D-37A0A075B6S9 117 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 CT83Q5H943 113 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 VSTM2AQ8TAG5 236 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms