RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 DOCK11Q5JSL3 2073 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV1-46P01743 117 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 MPZP25189 248 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 LTBRP36941 435 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF362Q5T0B9 420 aaPredicted RBP3.37□□□□□ -1.87
SCN3A-201ENST00000283254 RBBP6Q7Z6E9 1792 aaKnown RBP3.37□□□□□ -1.87
SCN3A-201ENST00000283254 PSG8Q9UQ74 426 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 TRAV8-2A0A0B4J237 113 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 NDUFB8O95169 186 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 CXCL2P19875 107 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 SRSF2Q01130 221 aaKnown RBP3.37□□□□□ -1.87
SCN3A-201ENST00000283254 HSD52Q0P140 79 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 NIT1Q86X76 327 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF525Q8N782 197 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 TRAV1-1A0A0B4J248 108 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 C4orf51C9J302 202 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 CELA3BP08861 270 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 DAD1P61803 113 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 TFF3Q07654 80 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 SLAQ13239 276 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 TMEM126AQ9H061 195 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 S4R3C0 116 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 YLPM1P49750 1951 aaKnown RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV3-23P01764 117 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 IFI27L1Q96BM0 104 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 SSBP4Q9BWG4 385 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 LY96Q9Y6Y9 160 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 TRAV12-3A0A0B4J271 114 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 PIN1P1O15428 100 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 LINC00614P0C842 121 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 MIR17HGQ75NE6 70 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 PLPPR1Q8TBJ4 325 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 SPAG8Q99932 426 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 CHD3Q12873 2000 aaKnown RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 A0A0G2JMM0 328 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 A0A1W2PPB8 328 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 A0A1W2PRS3 328 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 MBD3L4A6NDZ8 208 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 MBD3L3A6NE82 208 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 MBD3L5A6NJ08 208 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 KIR3DP1A8MWS1 328 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 EFNB1P98172 346 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 C1orf194Q5T5A4 169 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 MBD3L2Q8NHZ7 208 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF479Q96JC4 524 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 TIMM21Q9BVV7 248 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 GNB1LQ9BYB4 327 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 ATAD5Q96QE3 1844 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 IGKCP01834 107 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 PRTN3P24158 256 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 PMVKQ15126 192 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 C21orf62-AS1Q17RA5 79 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 KLF17Q5JT82 389 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 SFTA2Q6UW10 78 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 SNHG12Q9BXW3 62 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 WDR83OSQ9Y284 106 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV1-3A0A0C4DH29 117 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 NDUFA3O95167 84 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 DEFB130BP0DP73 79 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 DEFB130AP0DP74 79 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 TPTE2P1Q5T6R2 138 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 LINC00114Q6XXX2 140 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 INS-IGF2F8WCM5 200 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 MSMBP08118 114 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 SUPT4H1P63272 117 aaKnown RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 DLX4Q92988 240 aaPredicted RBP3.36□□□□□ -1.87
SCN3A-201ENST00000283254 ERG28Q9UKR5 140 aa3.36□□□□□ -1.87
SCN3A-201ENST00000283254 PRR14LQ5THK1 2151 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 TMEM178BH3BS89 294 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 ITGB1BP1O14713 200 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 TCRAP04437 139 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 CD59P13987 128 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 MDKP21741 143 aaPredicted RBP3.35□□□□□ -1.87
SCN3A-201ENST00000283254 SRSF4Q08170 494 aaKnown RBP3.35□□□□□ -1.87
SCN3A-201ENST00000283254 ACTL10Q5JWF8 245 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 FAM201AQ5SY85 155 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF562Q6V9R5 426 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 TMEM158Q8WZ71 300 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV1-18A0A0C4DH31 117 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 SCO2A0A1W2PP80 73 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 SH2D6Q7Z4S9 175 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 DOCK5Q9H7D0 1870 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 CGB7P0DN87 165 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 CRYGSP22914 178 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 GATA4P43694 442 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
SCN3A-201ENST00000283254 Q6ZS92 163 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 PRIMA1Q86XR5 153 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 ZMAT4Q9H898 229 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 COQ2Q96H96 371 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 UBE2E1P51965 193 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 TMEM242Q9NWH2 141 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 TRAV8-4A0A0B4J246 113 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 F5H768 121 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 RAMP1O60894 148 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 SRP19P09132 144 aaKnown RBP3.35□□□□□ -1.87
SCN3A-201ENST00000283254 GNLYP22749 145 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF876PQ49A33 203 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 ATOH7Q8N100 152 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms