RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 GOLT1AQ6ZVE7 132 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 C8orf31Q8N9H6 132 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 CMTM2Q8TAZ6 248 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 ARPC1AQ92747 370 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 HIST1H2BLQ99880 126 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 TCEAL7Q9BRU2 100 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 A6NNC1 897 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 M0R3E3 92 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 CORTO00230 105 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 PHOX2AO14813 284 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 IGKV1-17P01599 117 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 IGLC1P0CG04 106 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 SFTPCP11686 197 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 HOXB4P17483 251 aaPredicted RBP4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 MAS1LP35410 378 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 SRP14P37108 136 aaKnown RBP4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 ATP5IP56385 69 aaPredicted RBP4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 BAGE3Q86Y29 109 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 FXYD5Q96DB9 178 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 MRPL32Q9BYC8 188 aaKnown RBP4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 PITPNC1Q9UKF7 332 aa4.79□□□□□ -1.64
TNFSF4-201ENST00000281834 ELOA3CA0A087WX78 387 aaPredicted RBP4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 TRAV40A0A0B4J280 105 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 A0A1W2PRE2 83 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 PSMB11A5LHX3 300 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 LINC01548A6NM66 108 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 FNDC10F2Z333 226 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 LY6LH3BQJ8 138 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 GGCTO75223 188 aaKnown RBP4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 IGHV4-39P01824 125 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 AMY1AP04745 511 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 UNQ5815/PRO19632Q6UWF5 114 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 DTX2Q86UW9 622 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 LY6G5BQ8NDX9 201 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 CCL19Q99731 98 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 TXNDC17Q9BRA2 123 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 SSBP4Q9BWG4 385 aaPredicted RBP4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 SLC25A39Q9BZJ4 359 aaPredicted RBP4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 Q9H3A6 140 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 GSN-AS1Q9NRJ2 163 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 TMSB15BA0A087X1C1 80 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 F2Z2F3 143 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 K7EIM0 57 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 NUPR1O60356 82 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 CRYGBP07316 175 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 GZMBP10144 247 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 GPR183P32249 361 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 RPL15P61313 204 aaKnown RBP4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 ZNF329Q86UD4 541 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 LINC00469Q8N7U9 141 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 TMEM116Q8NCL8 245 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 OR11H6Q8NGC7 330 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 CFHR4Q92496 578 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 HSPB9Q9BQS6 159 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 C19orf24Q9BVV8 132 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 MRPL18Q9H0U6 180 aaKnown RBP4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 IL36BQ9NZH7 164 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 IGHV4-61A0A0C4DH41 118 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 MUC21A0A0G2JKD1 596 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 MUC21A0A140T8X8 626 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 I3L2K1 104 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 M0R1W7 72 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 GATCO43716 136 aaKnown RBP4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 AMBPP02760 352 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 MUC21Q5SSG8 566 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 CCDC144NLQ6NUI1 221 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 TCF24Q7RTU0 167 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 C8orf46Q8TAG6 207 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 V9GYV3 84 aa4.78□□□□□ -1.64
TNFSF4-201ENST00000281834 CHD6Q8TD26 2715 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 IGKV3-7A0A075B6H7 116 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 NDUFB8O95169 186 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 SCGB1D1O95968 90 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 FAM106CPP0CH98 169 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 COL8A1P27658 744 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 TMEM249Q2WGJ8 235 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 CIARTQ8N365 385 aaPredicted RBP4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 PIP4P2Q8N4L2 257 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 THAP8Q8NA92 274 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 OR2D3Q8NGH3 330 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 RNF125Q96EQ8 232 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 BTF3L4Q96K17 158 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 TBX15Q96SF7 602 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 RNF2Q99496 336 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 SAMD10Q9BYL1 202 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 EPDR1Q9UM22 224 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 FASNP49327 2511 aaKnown RBP4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 CRISP2P16562 243 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 NTF3P20783 257 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 ACTL10Q5JWF8 245 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 LCNL1Q6ZST4 164 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 TMEM183AQ8IXX5 376 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 DAZAP1Q96EP5 407 aaKnown RBP4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 TRGV9Q99603 122 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 C21orf62Q9NYP8 219 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 FBXL7Q9UJT9 491 aa4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 PRRC2AP48634 2157 aaKnown RBP4.77□□□□□ -1.65
TNFSF4-201ENST00000281834 IGHV2-70DA0A0C4DH43 119 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms