RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 KIAA1109Q2LD37 5005 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 TEX48A0A1B0GUV7 120 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 DUXBA0A1W2PPF3 345 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 ZNF705FA8MVS1 300 aaPredicted RBP9.14□□□□□ -0.95
CD44-203ENST00000278386 M0R2N4 97 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 SOCS3O14543 225 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 ZNF705DP0CH99 300 aaPredicted RBP9.14□□□□□ -0.95
CD44-203ENST00000278386 ZNF705BP0CI00 300 aaPredicted RBP9.14□□□□□ -0.95
CD44-203ENST00000278386 C1orf194Q5T5A4 169 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 EBLN2Q6P2I7 272 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 POM121L12Q8N7R1 296 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 ZNF709Q8N972 641 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 TRGV9Q99603 122 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 RBM38Q9H0Z9 239 aaKnown RBP9.14□□□□□ -0.95
CD44-203ENST00000278386 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 SLC25A22Q9H936 323 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 GOLT1BQ9Y3E0 138 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
CD44-203ENST00000278386 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 SNRPGP15A8MWD9 76 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 F6UB75 175 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 ISLRO14498 428 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 MED6O75586 246 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 HTN3P15516 51 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 GALR1P47211 349 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 AP3S2P59780 193 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 PSG9Q00887 426 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 FAM78BQ5VT40 261 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 SAMD13Q5VXD3 122 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 SPATA31B1PQ5VZV4 182 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 TOMM5Q8N4H5 51 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 MCFD2Q8NI22 146 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 C16orf92Q96LL3 132 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 SOSTQ9BQB4 213 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 RPRMQ9NS64 109 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 PCLOQ9Y6V0 5065 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
CD44-203ENST00000278386 LOC102723971A0A1B0GUV8 181 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 WRBO00258 174 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 IFNA21P01568 189 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 HBE1P02100 147 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 TNFSF8P32971 234 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 MEOX2P50222 304 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 RPP30P78346 268 aaKnown RBP9.12□□□□□ -0.95
CD44-203ENST00000278386 AKR1C1Q04828 323 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 ZNF79Q15937 498 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 PYDC2Q56P42 97 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 TMEM128Q5BJH2 165 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 THAP8Q8NA92 274 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 CIB3Q96Q77 187 aaPredicted RBP9.12□□□□□ -0.95
CD44-203ENST00000278386 NIPSNAP3BQ9BS92 247 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 MAGT1Q9H0U3 335 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 SLC25A32Q9H2D1 315 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 DKK2Q9UBU2 259 aa9.12□□□□□ -0.95
CD44-203ENST00000278386 NACAE9PAV3 2078 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 IGKV1OR2-108A0A075B7D4 117 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 A0A0J9YX75 114 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 H3BP45 60 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 PITX3O75364 302 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 PAX9P55771 341 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 GGNBP1Q5YKI7 109 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 TRIM63Q969Q1 353 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 CLUHP3Q96NS8 147 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 TMEM208Q9BTX3 173 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 DOK5Q9P104 306 aa9.11□□□□□ -0.95
CD44-203ENST00000278386 YTHDF2Q9Y5A9 579 aaKnown RBP9.11□□□□□ -0.95
CD44-203ENST00000278386 IGLV2-18A0A075B6J9 118 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 SMCO3A2RU48 225 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 PRSS29PA6NIE9 313 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 SYNGR2O43760 224 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 CFDP00746 253 aaPredicted RBP9.1□□□□□ -0.95
CD44-203ENST00000278386 HOXB5P09067 269 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 SLC25A6P12236 298 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 ORM2P19652 201 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 RRN3P1Q2M238 152 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 LRTM2Q8N967 370 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 OR1B1Q8NGR6 318 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 C20orf173Q96LM9 149 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 RSG1Q9BU20 258 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 TMEM147Q9BVK8 224 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 TMED3Q9Y3Q3 217 aa9.1□□□□□ -0.95
CD44-203ENST00000278386 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 ZNF98A6NK75 572 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 SFT2D2O95562 160 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 GATA2P23769 480 aaPredicted RBP9.09□□□□□ -0.95
CD44-203ENST00000278386 S100A7P31151 101 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 DAD1P61803 113 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 FGL1Q08830 312 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 PPP1R1AQ13522 171 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 SPANXN5Q5MJ07 72 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 ACOT7LQ6ZUV0 252 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 C1orf158Q8N1D5 194 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 FAM210BQ96KR6 192 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 SLC25A21Q9BQT8 299 aaPredicted RBP9.09□□□□□ -0.95
CD44-203ENST00000278386 PLA2G2EQ9NZK7 142 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 SLC45A2Q9UMX9 530 aa9.09□□□□□ -0.95
CD44-203ENST00000278386 CCDC160A6NGH7 325 aa9.08□□□□□ -0.96
CD44-203ENST00000278386 PRSS46E5RG02 174 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms