RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 LYZL4Q96KX0 146 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 LINC01587Q99440 93 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 BSPH1Q075Z2 132 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 CD5LO43866 347 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 RFPL3SP0C7P2 107 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 GAS1P54826 345 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 GTSCR1Q86UQ5 136 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 GFRA3O60609 400 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 C2orf82Q6UX34 121 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 PRTN3P24158 256 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 PSG7Q13046 419 aa11.32□□□□□ -0.6
NOTCH1-201ENST00000277541 PRR32B1ATL7 298 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 EDA2RQ9HAV5 297 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 PF4P02776 101 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 ADAMTSL5Q6ZMM2 481 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 NCOA6Q14686 2063 aaPredicted RBP11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 IGKV3D-20A0A0C4DH25 116 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 WBP1Q96G27 269 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 WDR83OSQ9Y284 106 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 EFEMP2O95967 443 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 GAGE1Q13065 139 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 RSPO4Q2I0M5 234 aaPredicted RBP11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 FAM166AQ6J272 317 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 ITLN2Q8WWU7 325 aaPredicted RBP11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
NOTCH1-201ENST00000277541 WNK1Q9H4A3 2382 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 CD300EQ496F6 205 aaPredicted RBP11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 GFRA4Q9GZZ7 299 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 KIAA1549Q9HCM3 1950 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 TRGV11A0A075B6L2 103 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 CELA3BP08861 270 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 IGHV2-70P01814 119 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 NMSQ5H8A3 153 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 C20orf144Q9BQM9 153 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 NEU4Q8WWR8 484 aaPredicted RBP11.3□□□□□ -0.6
NOTCH1-201ENST00000277541 ADCYAP1P18509 176 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 LHX2P50458 406 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 HIST1H4AP62805 103 aaKnown RBP11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 RPP25LQ8N5L8 163 aaKnown RBP11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 TRGV2A0A075B6R0 118 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 LCN12Q6JVE5 192 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 TIAF1O95411 115 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 SIGLEC15Q6ZMC9 328 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 HAX1O00165 279 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 NAA38Q9BRA0 125 aaKnown RBP11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 IGLV3-32A0A0A0MS00 114 aa11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 ZNF106Q9H2Y7 1883 aaKnown RBP11.29□□□□□ -0.6
NOTCH1-201ENST00000277541 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 TMEM133Q9H2Q1 129 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 TRGV9Q99603 122 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 TGFBR3LH3BV60 316 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 IGHV3OR16-8A0A075B7F1 116 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 ZNF688P0C7X2 276 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 TMEM14EPQ6UXP3 125 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 EREGO14944 169 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 LYPD3O95274 346 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 PRR19A6NJB7 356 aa11.28□□□□□ -0.6
NOTCH1-201ENST00000277541 PSG3Q16557 428 aa11.27□□□□□ -0.6
NOTCH1-201ENST00000277541 ZNF837Q96EG3 531 aaPredicted RBP11.27□□□□□ -0.6
NOTCH1-201ENST00000277541 ZNF319Q9P2F9 582 aa11.27□□□□□ -0.6
NOTCH1-201ENST00000277541 CHAC1Q9BUX1 264 aa11.27□□□□□ -0.6
NOTCH1-201ENST00000277541 POLR3KQ9Y2Y1 108 aaPredicted RBP11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 LEPROTO15243 131 aa11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 IGHV1-2P23083 117 aa11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 NPIPB5A8MRT5 1133 aa11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 ITGB1BP1O14713 200 aa11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 OVOL1O14753 267 aa11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 MST1P26927 711 aa11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 Q0VG73 95 aa11.27□□□□□ -0.61
NOTCH1-201ENST00000277541 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 RSPO3Q9BXY4 272 aaPredicted RBP11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 COL4A5P29400 1685 aa11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 TANC1Q9C0D5 1861 aa11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 MLNRO43193 412 aa11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 F8W1H4 67 aa11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 NCR2O95944 276 aa11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 CDKN1AP38936 164 aa11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
NOTCH1-201ENST00000277541 TOMM40O96008 361 aa11.25□□□□□ -0.61
NOTCH1-201ENST00000277541 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
NOTCH1-201ENST00000277541 CELA3AP09093 270 aa11.25□□□□□ -0.61
NOTCH1-201ENST00000277541 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
NOTCH1-201ENST00000277541 TRBV20-1A0A075B6N2 111 aa11.25□□□□□ -0.61
NOTCH1-201ENST00000277541 GLMPQ8WWB7 406 aa11.25□□□□□ -0.61
NOTCH1-201ENST00000277541 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
NOTCH1-201ENST00000277541 TNFRSF14Q92956 283 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms