RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MLANAQ16655 118 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 TEX36Q5VZQ5 186 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 TMEM136Q6ZRR5 245 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 TNFRSF18Q9Y5U5 241 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 RFNGQ9Y644 331 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 PGPEP1LA6NFU8 196 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
NPC1-201ENST00000269228 SRSF3P84103 164 aaKnown RBP11.13□□□□□ -0.63
NPC1-201ENST00000269228 REC114Q7Z4M0 266 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 ASCL2Q99929 193 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
NPC1-201ENST00000269228 PLCE1Q9P212 2302 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 TMEM262E9PQX1 116 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 C17orf58Q2M2W7 97 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 CR1LQ2VPA4 569 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 SEPSECSQ9HD40 501 aaKnown RBP11.13□□□□□ -0.63
NPC1-201ENST00000269228 A8MXK9 166 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 H7C1H1 209 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 CNTFRP26992 372 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 CDX1P47902 265 aaPredicted RBP11.13□□□□□ -0.63
NPC1-201ENST00000269228 PSMB2P49721 201 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 KLHL30-AS1Q8NEE0 82 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 TRGV9Q99603 122 aa11.13□□□□□ -0.63
NPC1-201ENST00000269228 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 CFHR2P36980 270 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 LCNL1Q6ZST4 164 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 MBD3L1Q8WWY6 194 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 STAG3L2P0CL84 134 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
NPC1-201ENST00000269228 CYTL1Q9NRR1 136 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 STAG3L3P0CL85 134 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
NPC1-201ENST00000269228 Q71RC1 249 aaPredicted RBP11.12□□□□□ -0.63
NPC1-201ENST00000269228 PCDH15Q96QU1 1955 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 A0A1W2PPI3 338 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 FGF16O43320 207 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 RPP25LQ8N5L8 163 aaKnown RBP11.11□□□□□ -0.63
NPC1-201ENST00000269228 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 MMP23AO75900 390 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 PPIFP30405 207 aaKnown RBP11.11□□□□□ -0.63
NPC1-201ENST00000269228 LEPP41159 167 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
NPC1-201ENST00000269228 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 USMG5Q96IX5 58 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 ZNF688P0C7X2 276 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 GTSCR1Q86UQ5 136 aa11.11□□□□□ -0.63
NPC1-201ENST00000269228 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 ATP6V0E1O15342 81 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 NCOR1P1Q9H4R4 102 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 CSPG4Q6UVK1 2322 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 K7ERU9 68 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 IGF2RP11717 2491 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 Q6AWC8 147 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 OCC1Q8TAD7 63 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 IGKV2-40A0A087WW87 121 aaPredicted RBP11.1□□□□□ -0.63
NPC1-201ENST00000269228 OVOL1O14753 267 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 WISP2O76076 250 aa11.1□□□□□ -0.63
NPC1-201ENST00000269228 IGKV2D-40P01614 121 aaPredicted RBP11.1□□□□□ -0.63
NPC1-201ENST00000269228 FREM1Q5H8C1 2179 aa11.09□□□□□ -0.63
NPC1-201ENST00000269228 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
NPC1-201ENST00000269228 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
NPC1-201ENST00000269228 PARD6GQ9BYG4 376 aaPredicted RBP11.09□□□□□ -0.63
NPC1-201ENST00000269228 LIME1Q9H400 295 aa11.09□□□□□ -0.63
NPC1-201ENST00000269228 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
NPC1-201ENST00000269228 NPIPB5A8MRT5 1133 aa11.09□□□□□ -0.63
NPC1-201ENST00000269228 ZNF124Q15973 351 aa11.09□□□□□ -0.63
NPC1-201ENST00000269228 C18orf15Q96N68 181 aa11.09□□□□□ -0.63
NPC1-201ENST00000269228 IZUMO1RA6ND01 250 aa11.08□□□□□ -0.63
NPC1-201ENST00000269228 C5orf52A6NGY3 159 aa11.08□□□□□ -0.63
NPC1-201ENST00000269228 FAM223BA6NKX1 122 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 OVOL3O00110 214 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 FOLR2P14207 255 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 ZNF833PQ6ZTB9 187 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 FAM223AQ8IWN6 122 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 REG4Q9BYZ8 158 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 GEMIN7Q9H840 131 aaKnown RBP11.08□□□□□ -0.64
NPC1-201ENST00000269228 G3V318 75 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 C15orf65H3BRN8 121 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 OR5AN1Q8NGI8 311 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 ARFGEF3Q5TH69 2177 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 C7orf71A4D174 169 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 ADORA2A-AS1P86434 159 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 SOX21Q9Y651 276 aaPredicted RBP11.08□□□□□ -0.64
NPC1-201ENST00000269228 DOCK11Q5JSL3 2073 aa11.08□□□□□ -0.64
NPC1-201ENST00000269228 APOHP02749 345 aaPredicted RBP11.07□□□□□ -0.64
NPC1-201ENST00000269228 ZNF134P52741 427 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
NPC1-201ENST00000269228 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
NPC1-201ENST00000269228 PPP1R17O96001 155 aa11.07□□□□□ -0.64
NPC1-201ENST00000269228 PAPPA-AS1Q5QFB9 102 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms