RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 PPP1R3EQ9H7J1 279 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 CHCHD2Q9Y6H1 151 aaPredicted RBP10.39□□□□□ -0.75
CDH11-201ENST00000268603 TRBV5-7A0A0A0MS05 114 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 IGHV1-18A0A0C4DH31 117 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 SUPT4H1P63272 117 aaKnown RBP10.39□□□□□ -0.75
CDH11-201ENST00000268603 GAGE6Q13070 117 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 SELLP14151 372 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 GUSBP1Q15486 140 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 ERVH48-1M5A8F1 160 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 RAMP3O60896 148 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 CD55P08174 381 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 ARID1AO14497 2285 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 A0A087WWC5 75 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 NHLRC3Q5JS37 347 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 FOCADQ5VW36 1801 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 ZNF138P52744 262 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 TBX6O95947 436 aaPredicted RBP10.38□□□□□ -0.75
CDH11-201ENST00000268603 EGR2P11161 476 aaPredicted RBP10.38□□□□□ -0.75
CDH11-201ENST00000268603 DOCK1Q14185 1865 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 AZU1P20160 251 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 TMEM105Q8N8V8 129 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 RP1P56715 2156 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 A0A087X0K7 114 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 CRLF1O75462 422 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 IGHV1-46P01743 117 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 TCF15Q12870 199 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 CT83Q5H943 113 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 Q8TAT8 98 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 IGF2BP2-AS1Q96M15 143 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 SVILO95425 2214 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 C1QCP02747 245 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 NBL1P41271 181 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 ADAMTSL5Q6ZMM2 481 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 GNB1LQ9BYB4 327 aa10.38□□□□□ -0.75
CDH11-201ENST00000268603 DKK1O94907 266 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 NPDC1Q9NQX5 325 aaPredicted RBP10.37□□□□□ -0.75
CDH11-201ENST00000268603 LINC01619G3V211 115 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 RPL18AQ02543 176 aaKnown RBP10.37□□□□□ -0.75
CDH11-201ENST00000268603 KLF17Q5JT82 389 aaPredicted RBP10.37□□□□□ -0.75
CDH11-201ENST00000268603 LYZL1Q6UWQ5 148 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 WFDC6Q9BQY6 131 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 RHPN1-AS1Q9BWJ2 59 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 SLC25A16P16260 332 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 UNC13CQ8NB66 2214 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 hDV102S1A0JD36 115 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 TMEM14DPA8MWL7 114 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 COL4A5P29400 1685 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 LY6G5BQ8NDX9 201 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 ABCA3Q99758 1704 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 C1QTNF5Q9BXJ0 243 aa10.37□□□□□ -0.75
CDH11-201ENST00000268603 POLR2AP24928 1970 aaKnown RBP10.36□□□□□ -0.75
CDH11-201ENST00000268603 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 GAS1P54826 345 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 RUSC1-AS1Q66K80 236 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 SHANK3Q9BYB0 1731 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 SH2D1AO60880 128 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
CDH11-201ENST00000268603 Q5BKY6 102 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 ZNF525Q8N782 197 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 USMG5Q96IX5 58 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 MIA3Q5JRA6 1907 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 IGKV1-5P01602 117 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 ZNF883P0CG24 379 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 PSG3Q16557 428 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 TSKUQ8WUA8 353 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 SPRR3Q9UBC9 169 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 IGHV1-3A0A0C4DH29 117 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 TMEM200BQ69YZ2 307 aa10.36□□□□□ -0.75
CDH11-201ENST00000268603 MCRIP2Q9BUT9 160 aaKnown RBP10.36□□□□□ -0.75
CDH11-201ENST00000268603 RPUSD1Q9UJJ7 312 aaKnown RBP10.36□□□□□ -0.75
CDH11-201ENST00000268603 ARHGEF17Q96PE2 2063 aaPredicted RBP10.36□□□□□ -0.75
CDH11-201ENST00000268603 FOXG1P55316 489 aaPredicted RBP10.35□□□□□ -0.75
CDH11-201ENST00000268603 IGHG4P01861 327 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 C10orf55Q5SWW7 151 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 TRIP12Q14669 1992 aaPredicted RBP10.35□□□□□ -0.75
CDH11-201ENST00000268603 FAM223BA6NKX1 122 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 IGLV2-23P01705 113 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 KIR3DS1Q14943 382 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 C9orf139Q6ZV77 190 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 FAM223AQ8IWN6 122 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 LINC01559Q495D7 138 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 IL17RELQ6ZVW7 336 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 SCN2AQ99250 2005 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 IGHV3-38A0A0C4DH36 116 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 PRSS23O95084 383 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 CSRP1P21291 193 aaKnown RBP10.35□□□□□ -0.75
CDH11-201ENST00000268603 MINOS1Q5TGZ0 78 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 WFDC9Q8NEX5 89 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 MINOS1-NBL1R4GNA1 71 aa10.35□□□□□ -0.75
CDH11-201ENST00000268603 COL5A3P25940 1745 aaPredicted RBP10.35□□□□□ -0.75
CDH11-201ENST00000268603 OCC1Q8TAD7 63 aa10.34□□□□□ -0.75
CDH11-201ENST00000268603 CARHSP1Q9Y2V2 147 aaKnown RBP10.34□□□□□ -0.75
CDH11-201ENST00000268603 COL24A1Q17RW2 1714 aa10.34□□□□□ -0.75
CDH11-201ENST00000268603 IGHV4-4A0A075B6R2 117 aa10.34□□□□□ -0.75
CDH11-201ENST00000268603 OVOL3O00110 214 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms