RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 TDGF1P13385 188 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 EVI2AP22794 236 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 NEUROG1Q92886 237 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 CHCHD1Q96BP2 118 aaKnown RBP9.47□□□□□ -0.89
VPS33A-201ENST00000267199 UBTD1Q9HAC8 227 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 MEF2CQ06413 473 aaPredicted RBP9.47□□□□□ -0.89
VPS33A-201ENST00000267199 FER1L6-AS1Q8NA97 138 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 LINC01560Q8TB33 94 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 DLX6P56179 175 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 SRSF6Q13247 344 aaKnown RBP9.47□□□□□ -0.89
VPS33A-201ENST00000267199 OCIAD2Q56VL3 154 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
VPS33A-201ENST00000267199 IGKV3-15P01624 115 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 IGLL1P15814 213 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 MRPL52Q86TS9 123 aaKnown RBP9.46□□□□□ -0.89
VPS33A-201ENST00000267199 RCHY1Q96PM5 261 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 PLSCR4Q9NRQ2 329 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.89
VPS33A-201ENST00000267199 ARFGEF3Q5TH69 2177 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 A0A1B0GWJ7 208 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 IGHV1-46P01743 117 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 SSC4DQ8WTU2 575 aa9.46□□□□□ -0.89
VPS33A-201ENST00000267199 YPEL3P61236 119 aaPredicted RBP9.46□□□□□ -0.9
VPS33A-201ENST00000267199 PSG9Q00887 426 aa9.46□□□□□ -0.9
VPS33A-201ENST00000267199 OR4X2Q8NGF9 303 aa9.46□□□□□ -0.9
VPS33A-201ENST00000267199 RPUSD1Q9UJJ7 312 aaKnown RBP9.46□□□□□ -0.9
VPS33A-201ENST00000267199 PSG8Q9UQ74 426 aa9.46□□□□□ -0.9
VPS33A-201ENST00000267199 FAM90A9PA6NNJ1 464 aa9.46□□□□□ -0.9
VPS33A-201ENST00000267199 SLAQ13239 276 aa9.46□□□□□ -0.9
VPS33A-201ENST00000267199 FAM74A4Q5TZK3 123 aa9.46□□□□□ -0.9
VPS33A-201ENST00000267199 MRPL27Q9P0M9 148 aaKnown RBP9.46□□□□□ -0.9
VPS33A-201ENST00000267199 HSD52Q0P140 79 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 ATP5L2Q7Z4Y8 100 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 FAM57AQ8TBR7 257 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 RNF138Q8WVD3 245 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 ABHD17AQ96GS6 310 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 SCRT1Q9BWW7 348 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 ZNF256Q9Y2P7 627 aaPredicted RBP9.45□□□□□ -0.9
VPS33A-201ENST00000267199 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 BCL6BQ8N143 479 aaPredicted RBP9.45□□□□□ -0.9
VPS33A-201ENST00000267199 MS4A6AQ9H2W1 248 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 IGKV1D-17A0A075B6S4 117 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 D6R8Y8 96 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 ZNF479Q96JC4 524 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 VKORC1Q9BQB6 163 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 OTORQ9NRC9 128 aa9.45□□□□□ -0.9
VPS33A-201ENST00000267199 B9A039 149 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 KIR3DS1Q14943 382 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 WDR86Q86TI4 376 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 RAXQ9Y2V3 346 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 LY96Q9Y6Y9 160 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 GTSCR1Q86UQ5 136 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 OR5AN1Q8NGI8 311 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 SCGB3A1Q96QR1 104 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 SLC25A15Q9Y619 301 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 ATP5LO75964 103 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 DKK1O94907 266 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
VPS33A-201ENST00000267199 APOBEC3AP31941 199 aaPredicted RBP9.44□□□□□ -0.9
VPS33A-201ENST00000267199 EMP1P54849 157 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 TEX43Q6ZNM6 134 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 GAGE1Q13065 139 aa9.44□□□□□ -0.9
VPS33A-201ENST00000267199 PMS2P5A8MQ11 134 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 NPIPB5A8MRT5 1133 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 Q6AWC8 147 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 OR10J6PQ8NGY7 276 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 METTL26Q96S19 204 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 ZNRD1Q9P1U0 126 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 V9GYV3 84 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 KIR2DL5BA0A0G2JN68 375 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 KIR2DL5BA0A0G2JPC4 375 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 CD5LO43866 347 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 IGKV1-16P04430 117 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 TCRAP04437 139 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 COA6Q5JTJ3 125 aaKnown RBP9.43□□□□□ -0.9
VPS33A-201ENST00000267199 KIR2DL5AQ8N109 375 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 JMJD8Q96S16 334 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 FAM231BA6NCW3 169 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 LYNX1G3V0Z9 82 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-201ENST00000267199 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-201ENST00000267199 LYNX1P0DP58 116 aa9.43□□□□□ -0.9
VPS33A-201ENST00000267199 COX6CP09669 75 aa9.42□□□□□ -0.9
VPS33A-201ENST00000267199 CEACAM8P31997 349 aaPredicted RBP9.42□□□□□ -0.9
VPS33A-201ENST00000267199 DTX1Q86Y01 620 aa9.42□□□□□ -0.9
VPS33A-201ENST00000267199 A0A1B0GW15 77 aa9.42□□□□□ -0.9
VPS33A-201ENST00000267199 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
VPS33A-201ENST00000267199 DPM3Q9P2X0 92 aa9.42□□□□□ -0.9
VPS33A-201ENST00000267199 PLA2G5P39877 138 aa9.42□□□□□ -0.9
VPS33A-201ENST00000267199 RPL15P61313 204 aaKnown RBP9.42□□□□□ -0.9
VPS33A-201ENST00000267199 DEFB104AQ8WTQ1 72 aa9.42□□□□□ -0.9
VPS33A-201ENST00000267199 LOC105371242A0A075B767 164 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 SMKR1H3BMG3 65 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
VPS33A-201ENST00000267199 FAM106CPP0CH98 169 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms