RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 HILPDAQ9Y5L2 63 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 PGPA6NDG6 321 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 GATCO43716 136 aaKnown RBP10.26□□□□□ -0.77
CPSF6-201ENST00000266679 AMY1AP04745 511 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 MYCNOSP40205 109 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 MMDQ15546 238 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 IQCJQ1A5X6 159 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 KIAA1644Q3SXP7 199 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 STXBP6Q8NFX7 210 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 TIMD4Q96H15 378 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 CCDC168Q8NDH2 2452 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 C19orf84I3L1E1 186 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 CNIH1O95406 144 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 GP9P14770 177 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 TPPP2P59282 170 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 UBE2G1P62253 170 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 SSX2Q16385 188 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 EPDR1Q9UM22 224 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 IZUMO1RA6ND01 250 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 NBEAP1P0C6P0 100 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 CD24P25063 80 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 HTR1DP28221 377 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 REC114Q7Z4M0 266 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 CBLN4Q9NTU7 201 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 HIGD1AQ9Y241 93 aa10.25□□□□□ -0.77
CPSF6-201ENST00000266679 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
CPSF6-201ENST00000266679 MT-ND6P03923 174 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 IGLC1P0CG04 106 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 PAX2Q02962 417 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 TMEM183BQ1AE95 376 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 NUDT10Q8NFP7 164 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 NUDT11Q96G61 164 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 WNT10AQ9GZT5 417 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 GNB4Q9HAV0 340 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 NAGKQ9UJ70 344 aa10.24□□□□□ -0.77
CPSF6-201ENST00000266679 ANKRD17O75179 2603 aaKnown RBP10.24□□□□□ -0.77
CPSF6-201ENST00000266679 I3L2K1 104 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 PSG1P11464 419 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 GRAMD2BQ96HH9 432 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 MAP1AP78559 2803 aaPredicted RBP10.23□□□□□ -0.77
CPSF6-201ENST00000266679 LOC105371242A0A075B767 164 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 PAX1P15863 534 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 CD33P20138 364 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 Q0VG73 95 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 USF2Q15853 346 aaPredicted RBP10.23□□□□□ -0.77
CPSF6-201ENST00000266679 FBLN7Q53RD9 439 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 Q6ZWC4 215 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 MBD6Q96DN6 1003 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 NOL4LQ96MY1 436 aaPredicted RBP10.23□□□□□ -0.77
CPSF6-201ENST00000266679 RNF5Q99942 180 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 RASL11BQ9BPW5 248 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 FAM103A1Q9BTL3 118 aaKnown RBP10.23□□□□□ -0.77
CPSF6-201ENST00000266679 Q9H3A6 140 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 DPM3Q9P2X0 92 aa10.23□□□□□ -0.77
CPSF6-201ENST00000266679 ZNF705FA8MVS1 300 aaPredicted RBP10.22□□□□□ -0.77
CPSF6-201ENST00000266679 NBR2O15453 112 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 ZNF705DP0CH99 300 aaPredicted RBP10.22□□□□□ -0.77
CPSF6-201ENST00000266679 ZNF705BP0CI00 300 aaPredicted RBP10.22□□□□□ -0.77
CPSF6-201ENST00000266679 ESDP10768 282 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 PLP1P60201 277 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 PAFAH1B2P68402 229 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 HES1Q14469 280 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 COX19Q49B96 90 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 CFHR4Q92496 578 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 HSPB9Q9BQS6 159 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 SAMD10Q9BYL1 202 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 C7orf69Q9H7B7 122 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 POLR3KQ9Y2Y1 108 aaPredicted RBP10.22□□□□□ -0.77
CPSF6-201ENST00000266679 ABCA4P78363 2273 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 A8MWP6 167 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 BMPR1BO00238 502 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 HLA-DQA1P01909 254 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 SRIP30626 198 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 ZNF600Q6ZNG1 722 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 OR11H6Q8NGC7 330 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 ATG101Q9BSB4 218 aa10.22□□□□□ -0.77
CPSF6-201ENST00000266679 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
CPSF6-201ENST00000266679 TOX4O94842 621 aa10.21□□□□□ -0.77
CPSF6-201ENST00000266679 APCSP02743 223 aa10.21□□□□□ -0.77
CPSF6-201ENST00000266679 C5orf17Q8NAS9 161 aa10.21□□□□□ -0.77
CPSF6-201ENST00000266679 TMEM68Q96MH6 324 aa10.21□□□□□ -0.77
CPSF6-201ENST00000266679 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.77
CPSF6-201ENST00000266679 VPS13CQ709C8 3753 aa10.21□□□□□ -0.78
CPSF6-201ENST00000266679 ODF3BA8MYP8 253 aa10.21□□□□□ -0.78
CPSF6-201ENST00000266679 K7EIM0 57 aa10.21□□□□□ -0.78
CPSF6-201ENST00000266679 CEACAM3P40198 252 aa10.21□□□□□ -0.78
CPSF6-201ENST00000266679 NUP35Q8NFH5 326 aa10.21□□□□□ -0.78
CPSF6-201ENST00000266679 NEU4Q8WWR8 484 aaPredicted RBP10.21□□□□□ -0.78
CPSF6-201ENST00000266679 TBX15Q96SF7 602 aa10.21□□□□□ -0.78
CPSF6-201ENST00000266679 S4R3C0 116 aa10.21□□□□□ -0.78
CPSF6-201ENST00000266679 M0R1W7 72 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 IGKV1-17P01599 117 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 TCRAP04437 139 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 HIST1H1EP10412 219 aaKnown RBP10.2□□□□□ -0.78
CPSF6-201ENST00000266679 CDKN1AP38936 164 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 KLF17Q5JT82 389 aaPredicted RBP10.2□□□□□ -0.78
CPSF6-201ENST00000266679 TOMM20LQ6UXN7 152 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms