RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 H3BTX0 84 aa13.31□□□□□ -0.28
CHKA-201ENST00000265689 STXBP6Q8NFX7 210 aa13.31□□□□□ -0.28
CHKA-201ENST00000265689 CCL19Q99731 98 aa13.31□□□□□ -0.28
CHKA-201ENST00000265689 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
CHKA-201ENST00000265689 GNG5P63218 68 aa13.31□□□□□ -0.28
CHKA-201ENST00000265689 NHLRC2Q8NBF2 726 aa13.31□□□□□ -0.28
CHKA-201ENST00000265689 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
CHKA-201ENST00000265689 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
CHKA-201ENST00000265689 TRAV34A0A0B4J273 112 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 NBEAP1P0C6P0 100 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 GP9P14770 177 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 OR1L6Q8NGR2 347 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 IL36BQ9NZH7 164 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 CSPG4Q6UVK1 2322 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.3□□□□□ -0.283e-7■■■■■ 28.8
CHKA-201ENST00000265689 PEX7O00628 323 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 MGST1P10620 155 aaKnown RBP13.3□□□□□ -0.28
CHKA-201ENST00000265689 HIST1H1BP16401 226 aaKnown RBP13.3□□□□□ -0.28
CHKA-201ENST00000265689 MYCNOSP40205 109 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 Q8N9W7 124 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 V9GYV3 84 aa13.3□□□□□ -0.28
CHKA-201ENST00000265689 NPIPB5A8MRT5 1133 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 FAM106CPP0CH98 169 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 SLC25A39Q9BZJ4 359 aaPredicted RBP13.29□□□□□ -0.28
CHKA-201ENST00000265689 IGLV11-55A0A075B6I3 123 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 PGPA6NDG6 321 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 GCGP01275 180 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 EGR2P11161 476 aaPredicted RBP13.29□□□□□ -0.28
CHKA-201ENST00000265689 RPL15P61313 204 aaKnown RBP13.29□□□□□ -0.28
CHKA-201ENST00000265689 PACRGQ96M98 296 aaPredicted RBP13.29□□□□□ -0.28
CHKA-201ENST00000265689 HIST1H2BLQ99880 126 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 PRO1933Q9H354 126 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 CDC42EP3Q9UKI2 254 aa13.29□□□□□ -0.28
CHKA-201ENST00000265689 IGHV7-81A0A0B4J1V7 117 aa13.28□□□□□ -0.28
CHKA-201ENST00000265689 CNN1P51911 297 aaKnown RBP13.28□□□□□ -0.28
CHKA-201ENST00000265689 DEFA6Q01524 100 aa13.28□□□□□ -0.28
CHKA-201ENST00000265689 TTC9CQ8N5M4 171 aa13.28□□□□□ -0.28
CHKA-201ENST00000265689 FAM168AQ92567 244 aa13.28□□□□□ -0.28
CHKA-201ENST00000265689 MRPL27Q9P0M9 148 aaKnown RBP13.28□□□□□ -0.28
CHKA-201ENST00000265689 IGHV4-61A0A0C4DH41 118 aa13.28□□□□□ -0.28
CHKA-201ENST00000265689 GATCO43716 136 aaKnown RBP13.28□□□□□ -0.28
CHKA-201ENST00000265689 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
CHKA-201ENST00000265689 TAS2R60P59551 318 aa13.28□□□□□ -0.28
CHKA-201ENST00000265689 ZNF600Q6ZNG1 722 aa13.28□□□□□ -0.28
CHKA-201ENST00000265689 IGHV3OR16-10A0A075B7F0 116 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 ISLRO14498 428 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 NPFFO15130 113 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 HSPB9Q9BQS6 159 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 EPDR1Q9UM22 224 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 CENPVL3A0A0U1RRI6 287 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 MAPK1IP1LQ8NDC0 245 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 SGK494Q96LW2 274 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 PIMREGQ9BSJ6 248 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 PITPNC1Q9UKF7 332 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 TRAPPC1Q9Y5R8 145 aa13.27□□□□□ -0.29
CHKA-201ENST00000265689 AKAP9Q99996 3911 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 IGHV3-23P01764 117 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 BRS3P32247 399 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 RPEL1Q2QD12 228 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 BTF3L4Q96K17 158 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 OSTCQ9NRP0 149 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 GNG7O60262 68 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 NDUFB8O95169 186 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 BAGE2Q86Y30 109 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 ZNF491Q8N8L2 437 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 C14orf144Q96I85 54 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 C1RLQ9NZP8 487 aa13.26□□□□□ -0.29
CHKA-201ENST00000265689 XKRY2A2RUG3 117 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 F8W735 103 aaPredicted RBP13.25□□□□□ -0.29
CHKA-201ENST00000265689 OR2J3O76001 311 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 TOMM40O96008 361 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 IL4P05112 153 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 FRMD6-AS1P0C7T7 363 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 MFAP4P55083 255 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 ATP5J2P56134 94 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 Q9H3A6 140 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
CHKA-201ENST00000265689 POLR3KQ9Y2Y1 108 aaPredicted RBP13.25□□□□□ -0.29
CHKA-201ENST00000265689 PAX8Q06710 450 aa13.24□□□□□ -0.29
CHKA-201ENST00000265689 IBA57Q5T440 356 aaKnown RBP13.24□□□□□ -0.29
CHKA-201ENST00000265689 OR8I2Q8N0Y5 310 aa13.24□□□□□ -0.29
CHKA-201ENST00000265689 BCL6BQ8N143 479 aaPredicted RBP13.24□□□□□ -0.29
CHKA-201ENST00000265689 RNF125Q96EQ8 232 aa13.24□□□□□ -0.29
CHKA-201ENST00000265689 IGHV4-30-2A0A087WSY4 118 aa13.24□□□□□ -0.29
CHKA-201ENST00000265689 SH2D7A6NKC9 451 aaPredicted RBP13.24□□□□□ -0.29
CHKA-201ENST00000265689 HLA-DRB1P01911 266 aa13.24□□□□□ -0.29
CHKA-201ENST00000265689 Q56UQ5 140 aa13.24□□□□□ -0.29
CHKA-201ENST00000265689 ITPR3Q14573 2671 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 COX6B1P14854 86 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 SERTAD4Q9NUC0 356 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 C21orf62Q9NYP8 219 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 TMEM14CQ9P0S9 112 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 PDZD2O15018 2839 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 H3BRN7 92 aa13.23□□□□□ -0.29
CHKA-201ENST00000265689 GOSR1O95249 250 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms