RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 FAM87AP0C7U9 286 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 SUMO3P55854 103 aaPredicted RBP7.12□□□□□ -1.27
VAPB-201ENST00000265619 GNG5P63218 68 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 MLANAQ16655 118 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 AAED1Q7RTV5 226 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 MKXQ8IYA7 352 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 FDCSPQ8NFU4 85 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 VGLL1Q99990 258 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 HEYLQ9NQ87 328 aaPredicted RBP7.12□□□□□ -1.27
VAPB-201ENST00000265619 PRR33A8MZF0 331 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 RNF125Q96EQ8 232 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 CDIP1Q9H305 208 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 INTS1Q8N201 2190 aaKnown RBP7.11□□□□□ -1.27
VAPB-201ENST00000265619 ABCA1O95477 2261 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 AGRNO00468 2067 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 LINC01548A6NM66 108 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 NPIPB11E5RHQ5 1161 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 GFRA3O60609 400 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 LTAP01374 205 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 IGHV3-13P01766 116 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 ZNF645Q8N7E2 425 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 ZNF747Q9BV97 191 aa7.11□□□□□ -1.27
VAPB-201ENST00000265619 A0A096LNJ9 63 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 TNFRSF6BO95407 300 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 VDAC2P45880 294 aaPredicted RBP7.1□□□□□ -1.27
VAPB-201ENST00000265619 CNEP1R1Q8N9A8 125 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 OR8A1Q8NGG7 326 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PHLDA1Q8WV24 401 aaPredicted RBP7.1□□□□□ -1.27
VAPB-201ENST00000265619 C7orf69Q9H7B7 122 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 KCNIP1Q9NZI2 227 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 A1L4Q6 167 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PROP1O75360 226 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 FOXG1P55316 489 aaPredicted RBP7.1□□□□□ -1.27
VAPB-201ENST00000265619 ZNF497Q6ZNH5 498 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 MOGAT3Q86VF5 341 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 GLMPQ8WWB7 406 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 GRAMD2BQ96HH9 432 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 TTTY12Q9BZ98 90 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 JPT1Q9UK76 154 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 CSMD1Q96PZ7 3565 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 OR2H2O95918 312 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PYYP10082 97 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 GCSHP23434 173 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 NMUP48645 174 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PRR20EP86478 221 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PRR20CP86479 221 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PRR20DP86480 221 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PRR20BP86481 221 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 PRR20AP86496 221 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 LCNL1Q6ZST4 164 aa7.1□□□□□ -1.27
VAPB-201ENST00000265619 CHCHD1Q96BP2 118 aaKnown RBP7.1□□□□□ -1.27
VAPB-201ENST00000265619 ZNF71Q9NQZ8 489 aaPredicted RBP7.1□□□□□ -1.27
VAPB-201ENST00000265619 B5MCH6 92 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 CFHR2P36980 270 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 ZNF766Q5HY98 468 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 ZFYVE26Q68DK2 2539 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 C8orf86Q6ZUL3 223 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 WFDC3Q8IUB2 231 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 RNF138Q8WVD3 245 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 COL12A1Q99715 3063 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 NABP2Q9BQ15 211 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 MRPL16Q9NX20 251 aaKnown RBP7.09□□□□□ -1.27
VAPB-201ENST00000265619 HSPB8Q9UJY1 196 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 IGKV2D-26A0A0A0MRZ7 120 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 A8MWL6 223 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 XGP55808 180 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 FADS6Q8N9I5 356 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 C1orf162Q8NEQ5 155 aaPredicted RBP7.09□□□□□ -1.27
VAPB-201ENST00000265619 RFESDQ8TAC1 157 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 OSR1Q8TAX0 266 aaPredicted RBP7.09□□□□□ -1.27
VAPB-201ENST00000265619 LINC00312Q9Y6C7 94 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 ACACBO00763 2458 aa7.09□□□□□ -1.27
VAPB-201ENST00000265619 TRBV7-9A0A0J9YWB2 115 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 A0A1W2PRD5 423 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 A0A1W2PRF3 423 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 A0A1W2PRM7 423 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 C12orf77C9JDV5 145 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 SIVA1O15304 175 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 MPDU1O75352 247 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 MRPL33O75394 65 aaKnown RBP7.09□□□□□ -1.28
VAPB-201ENST00000265619 OR5AL1P0C617 328 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 SPINK8P0C7L1 97 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 UTF1Q5T230 341 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 RASL11AQ6T310 242 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 FA2HQ7L5A8 372 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 GCSAMQ8N6F7 178 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 ASCL2Q99929 193 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 FAM173AQ9BQD7 235 aa7.09□□□□□ -1.28
VAPB-201ENST00000265619 PSPNO60542 156 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 HBBP68871 147 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 ADTRPQ96IZ2 230 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 FOXB1Q99853 325 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 DCTN5Q9BTE1 182 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 PLEKHA3Q9HB20 300 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 FZR1Q9UM11 496 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 PLCE1Q9P212 2302 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 PRRG2O14669 202 aa7.08□□□□□ -1.28
VAPB-201ENST00000265619 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms