RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 MMD2Q8IY49 270 aa5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 FAM110DQ8TAY7 271 aaPredicted RBP5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 TMEM37Q8WXS4 190 aa5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 MRPL20Q9BYC9 149 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 ZNF430Q9H8G1 570 aaPredicted RBP5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 OSTCQ9NRP0 149 aa5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 NDUFA4L2Q9NRX3 87 aa5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 IL36BQ9NZH7 164 aa5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 SOX21Q9Y651 276 aaPredicted RBP5.62□□□□□ -1.51
SMARCE1-201ENST00000264640 A0A087X0M5 115 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 A0A1B0GX30 115 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 LINC00587B1AMM8 73 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 PHOX2AO14813 284 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 FSTL3O95633 263 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 IGHV2-70P01814 119 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 RBP4P02753 201 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 OR10J4P0C629 311 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 LINC00869P0C866 280 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 NPPCP23582 126 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 PAFAH1B2P68402 229 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 GAMTQ14353 236 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 JOSD1Q15040 202 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 BEAN1Q3B7T3 259 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 TMEM200BQ69YZ2 307 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 TEX38Q6PEX7 206 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 TEX45Q8NA69 505 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 OCC1Q8TAD7 63 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 MRAPQ8TCY5 172 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 CCL17Q92583 94 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 NOL4LQ96MY1 436 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 HIST1H2BLQ99880 126 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 CITED1Q99966 193 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 ELOVL1Q9BW60 279 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 DNAJC4Q9NNZ3 241 aa5.61□□□□□ -1.51
SMARCE1-201ENST00000264640 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 IGHV3OR16-10A0A075B7F0 116 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 IGHV1-69-2A0A0G2JMI3 117 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 TCRBV4S1A1TA0A5B7 111 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 J3QLI3 93 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 TIMM23O14925 209 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 TPPP2P59282 170 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 ERVFC1-1P60608 527 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 YPEL3P61236 119 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 TMEM155Q4W5P6 130 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 PDZD11Q5EBL8 140 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 C10orf113Q5VZT2 155 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 DUX4L9Q6RFH8 374 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 MIR17HGQ75NE6 70 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 THAP8Q8NA92 274 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 MISP3Q96FF7 219 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 EAF1Q96JC9 268 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 RNF5Q99942 180 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 SLC25A33Q9BSK2 321 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 TMEM133Q9H2Q1 129 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 TNFRSF19Q9NS68 423 aa5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 YTHDF2Q9Y5A9 579 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-201ENST00000264640 IFITM10A6NMD0 228 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 SRRM4A7MD48 611 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 TNFRSF13BO14836 293 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 ENSAO43768 121 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 MMP23AO75900 390 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 AMBPP02760 352 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 IGKV1-16P04430 117 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 IGHV1-8P0DP01 117 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 CCL3L1P16619 93 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 RPL27AP46776 148 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 RPL15P61313 204 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 RANP62826 216 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 UBE2L3P68036 154 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 PAX2Q02962 417 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 LBHQ53QV2 105 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 KLF17Q5JT82 389 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 GFI1BQ5VTD9 330 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 SPATA31B1PQ5VZV4 182 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 GBGT1Q8N5D6 347 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 BEND2Q8NDZ0 799 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 OR1L6Q8NGR2 347 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 SMIM12Q96EX1 92 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 SRSF8Q9BRL6 282 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 PAXXQ9BUH6 204 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 GNB1LQ9BYB4 327 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 SEPSECSQ9HD40 501 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 RNF24Q9Y225 148 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 INSIG2Q9Y5U4 225 aa5.59□□□□□ -1.51
SMARCE1-201ENST00000264640 ISLRO14498 428 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 FOXH1O75593 365 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 HLA-DQA1P01909 254 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 DEFA4P12838 97 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 CRISP2P16562 243 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 CRYBB3P26998 211 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 DLX6P56179 175 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 LGALS4P56470 323 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 UBE2G1P62253 170 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 SUMO1P63165 101 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 CENPWQ5EE01 88 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 FAM162BQ5T6X4 162 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 RASL11AQ6T310 242 aa5.58□□□□□ -1.52
SMARCE1-201ENST00000264640 REC114Q7Z4M0 266 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms