RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 RNASE8Q8TDE3 154 aaKnown RBP9.96□□□□□ -0.82
CHMP3-201ENST00000263856 FAM222BQ8WU58 562 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 GPR82Q96P67 336 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 DYNLRB1Q9NP97 96 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 ZFHX2Q9C0A1 2572 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-201ENST00000263856 HSBP1L1C9JCN9 74 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 K7EM74 188 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 TM4SF5O14894 197 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 NUDT3O95989 172 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 HTR1DP28221 377 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 MBD6Q96DN6 1003 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 CHRDL1Q9BU40 450 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 ANKRD11Q6UB99 2663 aaPredicted RBP9.95□□□□□ -0.82
CHMP3-201ENST00000263856 A8MWL6 223 aa9.95□□□□□ -0.82
CHMP3-201ENST00000263856 LRRC10Q5BKY1 277 aa9.95□□□□□ -0.82
CHMP3-201ENST00000263856 C1orf185Q5T7R7 199 aa9.95□□□□□ -0.82
CHMP3-201ENST00000263856 GTSF1Q8WW33 167 aa9.95□□□□□ -0.82
CHMP3-201ENST00000263856 IGHV1-24A0A0C4DH33 117 aa9.95□□□□□ -0.82
CHMP3-201ENST00000263856 OR5AN1Q8NGI8 311 aa9.95□□□□□ -0.82
CHMP3-201ENST00000263856 TMEM167AQ8TBQ9 72 aa9.95□□□□□ -0.82
CHMP3-201ENST00000263856 C2orf70A6NJV1 201 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 GATA4P43694 442 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 RPL27AP46776 148 aaKnown RBP9.94□□□□□ -0.82
CHMP3-201ENST00000263856 TMEM108Q6UXF1 575 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 ZC2HC1AQ96GY0 325 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 LYNX1G3V0Z9 82 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 LYNX1P0DP58 116 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 FXYD7P58549 80 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 BSPH1Q075Z2 132 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 URB1-AS1Q96HZ7 61 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 COX11Q9Y6N1 276 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 LRBAP50851 2863 aa9.94□□□□□ -0.82
CHMP3-201ENST00000263856 SERTM2A0A1B0GWG4 89 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 C17orf100A8MU93 164 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 FCN3O75636 299 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 ETFRF1Q6IPR1 90 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 PNKDQ8N490 385 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 SRSF12Q8WXF0 261 aaKnown RBP9.93□□□□□ -0.82
CHMP3-201ENST00000263856 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
CHMP3-201ENST00000263856 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 IGHV2-26A0A0B4J1V2 119 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 FBXL15Q9H469 300 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 TCRAP04437 139 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 FBLN7Q53RD9 439 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 LOXL4Q96JB6 756 aa9.93□□□□□ -0.82
CHMP3-201ENST00000263856 CNIH1O95406 144 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 ADIPOQQ15848 244 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 C5orf17Q8NAS9 161 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 WIPF2Q8TF74 440 aaPredicted RBP9.92□□□□□ -0.82
CHMP3-201ENST00000263856 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 CTSZQ9UBR2 303 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 CUL9Q8IWT3 2517 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 A0A087X0K7 114 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 SYS1-DBNDD2H3BUS1 97 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 C17orf77Q96MU5 243 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 HIGD1AQ9Y241 93 aa9.92□□□□□ -0.82
CHMP3-201ENST00000263856 IGLV2-23P01705 113 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 PSG1P11464 419 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 ATP5IP56385 69 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-201ENST00000263856 TMEM186Q96B77 213 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 RELNP78509 3460 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 CEACAM8P31997 349 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-201ENST00000263856 UQCRFS1P47985 274 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 RELQ04864 619 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-201ENST00000263856 UBE2V1Q13404 147 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 RBPMS2Q6ZRY4 209 aaKnown RBP9.91□□□□□ -0.82
CHMP3-201ENST00000263856 MAP1LC3CQ9BXW4 147 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 OR2T8A6NH00 312 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 FAM169BQ8N8A8 192 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 TEX45Q8NA69 505 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 STXBP6Q8NFX7 210 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 OR8A1Q8NGG7 326 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 MRPS16Q9Y3D3 137 aaKnown RBP9.91□□□□□ -0.82
CHMP3-201ENST00000263856 INSIG2Q9Y5U4 225 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 AKAP6Q13023 2319 aa9.91□□□□□ -0.82
CHMP3-201ENST00000263856 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.9□□□□□ -0.82
CHMP3-201ENST00000263856 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 ARMS2P0C7Q2 107 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 SLC25A34Q6PIV7 304 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 PRSS3P2Q8NHM4 247 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 RASL11BQ9BPW5 248 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 C16orf97H3BN30 126 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 OR2J3O76001 311 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 CRYABP02511 175 aaKnown RBP9.9□□□□□ -0.82
CHMP3-201ENST00000263856 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-201ENST00000263856 KLF5Q13887 457 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-201ENST00000263856 TEX36Q5VZQ5 186 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 TMEM116Q8NCL8 245 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 OR4F17Q8NGA8 305 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 C7orf69Q9H7B7 122 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 SVEP1Q4LDE5 3571 aa9.9□□□□□ -0.82
CHMP3-201ENST00000263856 IGHV1-69-2A0A0G2JMI3 117 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 TMEM178BH3BS89 294 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 M0R3E3 92 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms