RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 KIR3DS1Q14943 382 aa9.93□□□□□ -0.82
CHMP2B-201ENST00000263780 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
CHMP2B-201ENST00000263780 CCL13Q99616 98 aa9.93□□□□□ -0.82
CHMP2B-201ENST00000263780 TMEM14CQ9P0S9 112 aa9.93□□□□□ -0.82
CHMP2B-201ENST00000263780 SLC25A15Q9Y619 301 aa9.93□□□□□ -0.82
CHMP2B-201ENST00000263780 K7EQM0 130 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 FAM201AQ5SY85 155 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 C9orf106Q8NAJ2 232 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 HIGD1AQ9Y241 93 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 E7EUB6 86 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 S100A7P31151 101 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 PRNTQ86SH4 94 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 UBALD2Q8IYN6 164 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 ZADH2Q8N4Q0 377 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 TMEM116Q8NCL8 245 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 DEFB108BQ8NET1 73 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 SRSF12Q8WXF0 261 aaKnown RBP9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 TMEM186Q96B77 213 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
CHMP2B-201ENST00000263780 TNCP24821 2201 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 CGB1A6NKQ9 187 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 SNAI2O43623 268 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 IGHV3-48P01763 117 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 ZNF883P0CG24 379 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 APOBEC3AP31941 199 aaPredicted RBP9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 TNFAIP6P98066 277 aaPredicted RBP9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 MSMPQ1L6U9 139 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 C3orf36Q3SXR2 165 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 SPRNQ5BIV9 151 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 CIARTQ8N365 385 aaPredicted RBP9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 MRPL36Q9P0J6 103 aaKnown RBP9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 FABP2P12104 132 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 HOXB4P17483 251 aaPredicted RBP9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 MC5RP33032 325 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 LGALS7P47929 136 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 OR8A1Q8NGG7 326 aa9.91□□□□□ -0.82
CHMP2B-201ENST00000263780 IGLV3-9A0A075B6K5 115 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 A0A1W2PPM0 123 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 LAMTOR5O43504 91 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 ARMS2P0C7Q2 107 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 CT45A10P0DMU9 189 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 DUX4L9Q6RFH8 374 aaPredicted RBP9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 ZNF493Q6ZR52 646 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 FAM216BQ8N7L0 139 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 SPCS1Q9Y6A9 102 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 M0R1B8 84 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 NCR2O95944 276 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 RBPJQ06330 500 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 C10orf55Q5SWW7 151 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 TEX36Q5VZQ5 186 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
CHMP2B-201ENST00000263780 CFAP54Q96N23 3096 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 A0A1W2PPI3 338 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 SCGB1A1P11684 91 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 TMEM11P17152 192 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 JMJD8Q96S16 334 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 THYN1Q9P016 225 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 ZNRD1Q9P1U0 126 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 IGLV2-23P01705 113 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 IGLV2-11P01706 119 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 TIMM23BQ5SRD1 257 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 ADAMTSL5Q6ZMM2 481 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 LYPD1Q8N2G4 141 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 LINC00311Q8N616 119 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 NPFFR1Q9GZQ6 430 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 U3KQK5 164 aa9.89□□□□□ -0.83
CHMP2B-201ENST00000263780 HBDP02042 147 aa9.88□□□□□ -0.83
CHMP2B-201ENST00000263780 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
CHMP2B-201ENST00000263780 IFI27P40305 119 aaPredicted RBP9.88□□□□□ -0.83
CHMP2B-201ENST00000263780 ZNF414Q96IQ9 312 aa9.88□□□□□ -0.83
CHMP2B-201ENST00000263780 ORMDL3Q8N138 153 aa9.88□□□□□ -0.83
CHMP2B-201ENST00000263780 PRELID3AQ96N28 172 aa9.88□□□□□ -0.83
CHMP2B-201ENST00000263780 TRAV8-1A0A0A6YYK1 113 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 OVOL3O00110 214 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 SLC25A17O43808 307 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 TNFRSF1AP19438 455 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 SCNM1Q9BWG6 230 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 SIGLEC8Q9NYZ4 499 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 H3BTX0 84 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 IGHV1-46P01743 117 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 RPL27AP46776 148 aaKnown RBP9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 CACNG7P62955 275 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 HCP5Q6MZN7 132 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 PIFOQ8TCI5 191 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 ZC2HC1AQ96GY0 325 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 SLC25A39Q9BZJ4 359 aaPredicted RBP9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
CHMP2B-201ENST00000263780 DSCAML1Q8TD84 2053 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 SERTM2A0A1B0GWG4 89 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 A0A1W2PNU3 283 aaPredicted RBP9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 NDUFS8O00217 210 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 LYZP61626 148 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 FOXE3Q13461 319 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 SAMD5Q5TGI4 173 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 SAMD13Q5VXD3 122 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms