RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SELENOKQ9Y6D0 94 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 A0A1B0GUS0 222 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 TEX46H3BTG2 121 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 HYPMO75409 117 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 FABP1P07148 127 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 HOXD3P31249 432 aaPredicted RBP7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 RPEL1Q2QD12 228 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 FAM78BQ5VT40 261 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 C10orf113Q5VZT2 155 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 ZNF767PQ75MW2 155 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 LURAP1LQ8IV03 231 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 OR1N2Q8NGR9 330 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 RAX2Q96IS3 184 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 ATP6V0BQ99437 205 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 KCNIP2Q9NS61 270 aa7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 MRPL27Q9P0M9 148 aaKnown RBP7.46□□□□□ -1.22
SNRNP40-201ENST00000263694 STAB1Q9NY15 2570 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 COL6A5A8TX70 2615 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 IGHV3-66A0A0C4DH42 116 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 UMAD1C9J7I0 102 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 RGS13O14921 159 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 SCGB2A1O75556 95 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 APOHP02749 345 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 SNRPCP09234 159 aaKnown RBP7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 FGF8P55075 233 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 RELQ04864 619 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 TM4SF20Q53R12 229 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 FAM209BQ5JX69 171 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 LCN15Q6UWW0 184 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 LINC00305Q7Z4B0 112 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 RNF141Q8WVD5 230 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 RAB24Q969Q5 203 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 HIGD1AQ9Y241 93 aa7.45□□□□□ -1.22
SNRNP40-201ENST00000263694 A0A1W2PPV4 95 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 LINC01619G3V211 115 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 NDUFA4O00483 81 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 MBP02144 154 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 NMBP08949 121 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 CDC34P49427 236 aaPredicted RBP7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 SYNJ2BPP57105 145 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 PLP1P60201 277 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 CCL20P78556 96 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 OR1L4Q8NGR5 311 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 SFT2D1Q8WV19 159 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 DPF1Q92782 380 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 SCRT1Q9BWW7 348 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 ACTR3CQ9C0K3 210 aaPredicted RBP7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 TMPRSS5Q9H3S3 457 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 FUT9Q9Y231 359 aa7.44□□□□□ -1.22
SNRNP40-201ENST00000263694 CCL24O00175 119 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 H2AFB1P0C5Y9 115 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 RHOBP62745 196 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 FAM106AQ4KMX7 169 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 PXDC1Q5TGL8 231 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 GPHB5Q86YW7 130 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 GATAD1Q8WUU5 269 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 TMEM190Q8WZ59 177 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 DLX4Q92988 240 aaPredicted RBP7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 PFDN5Q99471 154 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 HRH4Q9H3N8 390 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 RABAC1Q9UI14 185 aa7.43□□□□□ -1.22
SNRNP40-201ENST00000263694 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 CTXND1A0A1B0GTU2 59 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 SEC14L6B5MCN3 397 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 H3BRN7 92 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 RAB5CP51148 216 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 KLF5Q13887 457 aaPredicted RBP7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 ZNF503Q96F45 646 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 FAM167A-AS1Q96KT0 104 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 CITED1Q99966 193 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 SHANK2-AS3Q9BTD1 123 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 MAP1LC3BQ9GZQ8 125 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 ZNF98A6NK75 572 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 H3BTX0 84 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 OR10J4P0C629 311 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 ARL14EPLP0DKL9 152 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 PYYP10082 97 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 NPPCP23582 126 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 BLOC1S1P78537 153 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 DPPA3Q6W0C5 159 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 NDUFA11Q86Y39 141 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 IQCF2Q8IXL9 164 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 MBD3L1Q8WWY6 194 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 SAT2Q96F10 170 aaPredicted RBP7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 METTL26Q96S19 204 aa7.42□□□□□ -1.22
SNRNP40-201ENST00000263694 TMEM213A2RRL7 107 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 STAG3L2P0CL84 134 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 STAG3L3P0CL85 134 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 C8orf88P0DMB2 117 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 ZP3P21754 424 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 CRYBB3P26998 211 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 RAB14P61106 215 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 FHL3Q13643 280 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 CLLU1Q5K131 121 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 ADAMTSL5Q6ZMM2 481 aa7.41□□□□□ -1.22
SNRNP40-201ENST00000263694 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms