RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 E9PLN8 166 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 PAX1P15863 534 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 LINC00158P58513 81 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 PSMG4Q5JS54 123 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 FAM90A2PQ658T7 463 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 HS3ST6Q96QI5 342 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 SNHG12Q9BXW3 62 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 EDA2RQ9HAV5 297 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 SIPA1L1O43166 1804 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 PVRIGQ6DKI7 326 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 TMEM158Q8WZ71 300 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 GBF1Q92538 1859 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 A8MWP6 167 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 IGHV3-53P01767 116 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 SLC25A2Q9BXI2 301 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 MS4A6AQ9H2W1 248 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 PNRC2Q9NPJ4 139 aaKnown RBP9.9□□□□□ -0.82
SMG6-201ENST00000263073 LOC285556D6RIA3 1793 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 MED12Q93074 2177 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 TMEM167AQ8TBQ9 72 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 SDK2Q58EX2 2172 aa9.9□□□□□ -0.82
SMG6-201ENST00000263073 IGHV1-46P01743 117 aa9.9□□□□□ -0.83
SMG6-201ENST00000263073 ERCC8Q13216 396 aa9.9□□□□□ -0.83
SMG6-201ENST00000263073 ORMDL2Q53FV1 153 aa9.9□□□□□ -0.83
SMG6-201ENST00000263073 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.83
SMG6-201ENST00000263073 TRAV8-3A0A0A6YYJ7 113 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 CFHR1Q03591 330 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 CITED2Q99967 270 aaPredicted RBP9.89□□□□□ -0.83
SMG6-201ENST00000263073 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 FAM90A1Q86YD7 464 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 CYYR1Q96J86 154 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 STHQ8IWL8 128 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 A0A1B0GW64 132 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 PLNP26678 52 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 C14orf178Q8N769 122 aaPredicted RBP9.89□□□□□ -0.83
SMG6-201ENST00000263073 GREB1LQ9C091 1923 aaPredicted RBP9.89□□□□□ -0.83
SMG6-201ENST00000263073 LTBP1Q14766 1721 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 SPINK8P0C7L1 97 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 QRFPP83859 136 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 TMEM200BQ69YZ2 307 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 SPSB3Q6PJ21 355 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 A0A0G2JMZ2 1700 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 LRRC37A2A6NM11 1700 aa9.89□□□□□ -0.83
SMG6-201ENST00000263073 BRCA1P38398 1863 aaKnown RBP9.89□□□□□ -0.83
SMG6-201ENST00000263073 PLXNA1Q9UIW2 1896 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 NRN1LQ496H8 165 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 COX11Q9Y6N1 276 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 ABCA7Q8IZY2 2146 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 A0A087WWL8 130 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 CLPSP04118 112 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 CDPF1Q6NVV7 123 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 TMEM14EPQ6UXP3 125 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 GGNQ86UU5 652 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 TMEM105Q8N8V8 129 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 MBNL3Q9NUK0 354 aaKnown RBP9.88□□□□□ -0.83
SMG6-201ENST00000263073 TRAV1-1A0A0B4J248 108 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 ATXN8Q156A1 80 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 FAM168AQ92567 244 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 SLC50A1Q9BRV3 221 aa9.88□□□□□ -0.83
SMG6-201ENST00000263073 ZC2HC1BQ5TFG8 222 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 TRAV40A0A0B4J280 105 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 ZNF876PQ49A33 203 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 FAM57AQ8TBR7 257 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 C15orf62A8K5M9 175 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 C1orf162Q8NEQ5 155 aaPredicted RBP9.87□□□□□ -0.83
SMG6-201ENST00000263073 OR9G4Q8NGQ1 327 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 CHAC1Q9BUX1 264 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 LCTP09848 1927 aa9.87□□□□□ -0.83
SMG6-201ENST00000263073 ADARB2-AS1A8MUL3 147 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 PAX8Q06710 450 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 FAM166AQ6J272 317 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 IGHV2-26A0A0B4J1V2 119 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 TMEM213A2RRL7 107 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 CHCHD5Q9BSY4 110 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 CSTL1Q9H114 145 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 APC2O95996 2303 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 TET1Q8NFU7 2136 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 PPBPP02775 128 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 CFHR2P36980 270 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 SLC25A48Q6ZT89 311 aaKnown RBP9.86□□□□□ -0.83
SMG6-201ENST00000263073 Q6ZVH6 145 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 PHLDA1Q8WV24 401 aaPredicted RBP9.86□□□□□ -0.83
SMG6-201ENST00000263073 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 SPXQ9BT56 116 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 FER1L5A0AVI2 2057 aa9.86□□□□□ -0.83
SMG6-201ENST00000263073 C9JAW5 83 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 LINC00477Q96M19 166 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 CASP8AP2Q9UKL3 1982 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 F2Z2F3 143 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 SLC25A20O43772 301 aa9.85□□□□□ -0.83
SMG6-201ENST00000263073 YAE1D1Q9NRH1 226 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms