RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 NDUFA4L2Q9NRX3 87 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 ZNRD1Q9P1U0 126 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 DMXL2Q8TDJ6 3036 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 SPRNQ5BIV9 151 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 ITLN1Q8WWA0 313 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 FMC1Q96HJ9 113 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 LTAP01374 205 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 FGF6P10767 208 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 CEACAM3P40198 252 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 HES3Q5TGS1 186 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 DUX4L9Q6RFH8 374 aaPredicted RBP12.05□□□□□ -0.48
XRCC1-201ENST00000262887 TEX45Q8NA69 505 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 OR10AG1Q8NH19 301 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 HARBI1Q96MB7 349 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 NPFFR1Q9GZQ6 430 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 RABAC1Q9UI14 185 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 NCR2O95944 276 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
XRCC1-201ENST00000262887 FAM87AP0C7U9 286 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 ORM2P19652 201 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 CFHR2P36980 270 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 CKS1BP61024 79 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 OR4A5Q8NH83 315 aa12.05□□□□□ -0.48
XRCC1-201ENST00000262887 NAA38Q9BRA0 125 aaKnown RBP12.05□□□□□ -0.48
XRCC1-201ENST00000262887 PRR14LQ5THK1 2151 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 A0A0G2JLM5 398 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 E7EUB6 86 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 HAX1O00165 279 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 THYN1Q9P016 225 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 PCNX2A6NKB5 2137 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 IGKV1D-37A0A075B6S9 117 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 KIR3DS1Q14943 382 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 DPF1Q92782 380 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 PERPQ96FX8 193 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 SPRY4Q9C004 299 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 JKAMPQ9P055 326 aa12.04□□□□□ -0.48
XRCC1-201ENST00000262887 IGHV1-18A0A0C4DH31 117 aa12.03□□□□□ -0.48
XRCC1-201ENST00000262887 CSN1S1P47710 185 aa12.03□□□□□ -0.48
XRCC1-201ENST00000262887 SLC25A48Q6ZT89 311 aaKnown RBP12.03□□□□□ -0.48
XRCC1-201ENST00000262887 HILPDAQ9Y5L2 63 aa12.03□□□□□ -0.48
XRCC1-201ENST00000262887 ATMQ13315 3056 aa12.03□□□□□ -0.48
XRCC1-201ENST00000262887 HSD52Q0P140 79 aa12.03□□□□□ -0.48
XRCC1-201ENST00000262887 OSR1Q8TAX0 266 aaPredicted RBP12.03□□□□□ -0.48
XRCC1-201ENST00000262887 COL8A1P27658 744 aa12.02□□□□□ -0.48
XRCC1-201ENST00000262887 WT1-ASQ06250 92 aa12.02□□□□□ -0.48
XRCC1-201ENST00000262887 MED13Q9UHV7 2174 aa12.02□□□□□ -0.49
XRCC1-201ENST00000262887 DSCAML1Q8TD84 2053 aa12.02□□□□□ -0.49
XRCC1-201ENST00000262887 MSMPQ1L6U9 139 aa12.02□□□□□ -0.49
XRCC1-201ENST00000262887 FA2HQ7L5A8 372 aa12.02□□□□□ -0.49
XRCC1-201ENST00000262887 C1orf162Q8NEQ5 155 aaPredicted RBP12.02□□□□□ -0.49
XRCC1-201ENST00000262887 VSTM2AQ8TAG5 236 aa12.02□□□□□ -0.49
XRCC1-201ENST00000262887 FAM222BQ8WU58 562 aa12.02□□□□□ -0.49
XRCC1-201ENST00000262887 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.49
XRCC1-201ENST00000262887 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
XRCC1-201ENST00000262887 SERTM2A0A1B0GWG4 89 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 NPIPB6E9PJ23 425 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 H3BTX0 84 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 SPRY3O43610 288 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 IGLV1-44P01699 117 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 TCRAP04437 139 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 THAP8Q8NA92 274 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 PRSS3P2Q8NHM4 247 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 GVINP1Q7Z2Y8 2422 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 PTPRZ1P23471 2315 aaPredicted RBP12.01□□□□□ -0.49
XRCC1-201ENST00000262887 LHBP01229 141 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 ACP1P24666 158 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
XRCC1-201ENST00000262887 RPL24P83731 157 aaKnown RBP12.01□□□□□ -0.49
XRCC1-201ENST00000262887 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 BOD1L2Q8IYS8 172 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 RAB37Q96AX2 223 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 MRPL20Q9BYC9 149 aaKnown RBP12.01□□□□□ -0.49
XRCC1-201ENST00000262887 RPUSD1Q9UJJ7 312 aaKnown RBP12.01□□□□□ -0.49
XRCC1-201ENST00000262887 DEFB108BQ8NET1 73 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 OR5AN1Q8NGI8 311 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 SPCS1Q9Y6A9 102 aa12.01□□□□□ -0.49
XRCC1-201ENST00000262887 TANC2Q9HCD6 1990 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 DSPP15924 2871 aaKnown RBP12□□□□□ -0.49
XRCC1-201ENST00000262887 KNTC1P50748 2209 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 AKAP13Q12802 2813 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 A1L4Q6 167 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 KLK10O43240 276 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 KIR2DL2P43627 348 aaPredicted RBP12□□□□□ -0.49
XRCC1-201ENST00000262887 OR8A1Q8NGG7 326 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 Q9H3A6 140 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 TEX48A0A1B0GUV7 120 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 A0A1W2PPM0 123 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 INS-IGF2F8WCM5 200 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 OR9G4Q8NGQ1 327 aa12□□□□□ -0.49
XRCC1-201ENST00000262887 TRAV8-1A0A0A6YYK1 113 aa11.99□□□□□ -0.49
XRCC1-201ENST00000262887 A0A1B0GUT8 65 aa11.99□□□□□ -0.49
XRCC1-201ENST00000262887 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
XRCC1-201ENST00000262887 CD300EQ496F6 205 aaPredicted RBP11.99□□□□□ -0.49
XRCC1-201ENST00000262887 CIARTQ8N365 385 aaPredicted RBP11.99□□□□□ -0.49
XRCC1-201ENST00000262887 GAGE12HA6NDE8 117 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms