RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 DPPA3Q6W0C5 159 aa21.58■■□□□ 1.05
SMARCD3-201ENST00000262188 SGMS2Q8NHU3 365 aa21.58■■□□□ 1.05
SMARCD3-201ENST00000262188 UBE2G2P60604 165 aa21.57■■□□□ 1.04
SMARCD3-201ENST00000262188 UNQ5815/PRO19632Q6UWF5 114 aa21.57■■□□□ 1.04
SMARCD3-201ENST00000262188 FAM213BQ8TBF2 198 aa21.57■■□□□ 1.04
SMARCD3-201ENST00000262188 OR4C12Q96R67 309 aa21.57■■□□□ 1.04
SMARCD3-201ENST00000262188 PSENENQ9NZ42 101 aa21.57■■□□□ 1.04
SMARCD3-201ENST00000262188 FAM24AA6NFZ4 105 aa21.57■■□□□ 1.04
SMARCD3-201ENST00000262188 JMJD8Q96S16 334 aa21.57■■□□□ 1.04
SMARCD3-201ENST00000262188 TMEM267Q0VDI3 215 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 SPSB3Q6PJ21 355 aa21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 ELLP55199 621 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 C10orf99Q6UWK7 81 aa21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 OR2C3Q8N628 320 aa21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 CYB561D1Q8N8Q1 229 aa21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 RAB40CQ96S21 281 aa21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 RPH3ALQ9UNE2 315 aa21.56■■□□□ 1.04
SMARCD3-201ENST00000262188 MFAP2P55001 183 aa21.55■■□□□ 1.04
SMARCD3-201ENST00000262188 NUDT11Q96G61 164 aa21.55■■□□□ 1.04
SMARCD3-201ENST00000262188 P2RX4Q99571 388 aa21.55■■□□□ 1.04
SMARCD3-201ENST00000262188 SMIM12Q96EX1 92 aa21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 TRAV41A0A0B4J266 112 aa21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 IGSF23A1L1A6 192 aa21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 C15orf62A8K5M9 175 aa21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 RNASE2P10153 161 aaKnown RBP21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 FHITP49789 147 aa21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 ZNF329Q86UD4 541 aa21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 BTF3L4Q96K17 158 aa21.54■■□□□ 1.04
SMARCD3-201ENST00000262188 IGF1P05019 195 aa21.53■■□□□ 1.04
SMARCD3-201ENST00000262188 ERHP84090 104 aaKnown RBP21.53■■□□□ 1.04
SMARCD3-201ENST00000262188 ELOVL1Q9BW60 279 aa21.53■■□□□ 1.04
SMARCD3-201ENST00000262188 PARD6GQ9BYG4 376 aaPredicted RBP21.53■■□□□ 1.04
SMARCD3-201ENST00000262188 RPL19P84098 196 aaKnown RBP21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 C19orf54Q5BKX5 351 aa21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 WNT10AQ9GZT5 417 aa21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 SERTAD4Q9NUC0 356 aa21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 SETD2Q9BYW2 2564 aaPredicted RBP21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 PFN1P07737 140 aaKnown RBP21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 ACTL10Q5JWF8 245 aa21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 Q8N2B8 174 aa21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 CIB3Q96Q77 187 aaPredicted RBP21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 SMIM3Q9BZL3 60 aa21.52■■□□□ 1.04
SMARCD3-201ENST00000262188 C2CD3Q4AC94 2353 aa21.52■■□□□ 1.03
SMARCD3-201ENST00000262188 CST7O76096 145 aa21.51■■□□□ 1.03
SMARCD3-201ENST00000262188 RPL23AP62750 156 aaKnown RBP21.51■■□□□ 1.03
SMARCD3-201ENST00000262188 ZNF738Q8NE65 137 aa21.51■■□□□ 1.03
SMARCD3-201ENST00000262188 VPS25Q9BRG1 176 aa21.51■■□□□ 1.03
SMARCD3-201ENST00000262188 TRAV1-1A0A0B4J248 108 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 ZNF705FA8MVS1 300 aaPredicted RBP21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 TYMSP04818 313 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 ZNF705DP0CH99 300 aaPredicted RBP21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 ZNF705BP0CI00 300 aaPredicted RBP21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 NPY1RP25929 384 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 ZNF266Q14584 549 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 LCNL1Q6ZST4 164 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 SDF2L1Q9HCN8 221 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 IGHV3-21A0A0B4J1V1 117 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 CBY3A6NI87 242 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 INS-IGF2F8WCM5 200 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 BSXQ3C1V8 233 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 CENPVQ7Z7K6 275 aaPredicted RBP21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 HAPLN4Q86UW8 402 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 TTC9CQ8N5M4 171 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 MS4A10Q96PG2 267 aa21.5■■□□□ 1.03
SMARCD3-201ENST00000262188 DEFA4P12838 97 aa21.49■■□□□ 1.03
SMARCD3-201ENST00000262188 ARL16Q0P5N6 197 aa21.49■■□□□ 1.03
SMARCD3-201ENST00000262188 HIST2H2BDQ6DRA6 164 aa21.49■■□□□ 1.03
SMARCD3-201ENST00000262188 TMEM182Q6ZP80 229 aaPredicted RBP21.49■■□□□ 1.03
SMARCD3-201ENST00000262188 TMEM252Q8N6L7 170 aa21.49■■□□□ 1.03
SMARCD3-201ENST00000262188 WFDC1Q9HC57 220 aa21.49■■□□□ 1.03
SMARCD3-201ENST00000262188 ZNF355PQ9NSJ1 428 aa21.49■■□□□ 1.03
SMARCD3-201ENST00000262188 IGHV3-48P01763 117 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 CRIP2P52943 208 aaPredicted RBP21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 PAFAH1B2P68402 229 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 MLANAQ16655 118 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 TMEM217Q8N7C4 229 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 OR2T6Q8NHC8 308 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 SRSF8Q9BRL6 282 aaKnown RBP21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 F11RQ9Y624 299 aaKnown RBP21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 NPIPB5A8MRT5 1133 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 CRYGCP07315 174 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 TAS2R30P59541 319 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 RNF151Q2KHN1 245 aa21.48■■□□□ 1.03
SMARCD3-201ENST00000262188 LOC102723971A0A1B0GUV8 181 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 F6UZH7 168 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 PPIFP30405 207 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 TMEM14EPQ6UXP3 125 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 FAM110DQ8TAY7 271 aaPredicted RBP21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 PINX1Q96BK5 328 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 FUT9Q9Y231 359 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 S4R3C0 116 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 TRAV30A0A087WSZ9 112 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 NDUFB8O95169 186 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 EWSR1Q01844 656 aaKnown RBP eCLIP21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 FANCD2OSQ96PS1 177 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 SLC45A2Q9UMX9 530 aa21.47■■□□□ 1.03
SMARCD3-201ENST00000262188 MAP1LC3B2A6NCE7 125 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 NBEAP1P0C6P0 100 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 CCL20P78556 96 aa21.46■■□□□ 1.03
SMARCD3-201ENST00000262188 CFHR3Q02985 330 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms