RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SPACA3Q8IXA5 215 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 SLC25A2Q9BXI2 301 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 CHODLQ9H9P2 273 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 TP53TG3Q9ULZ0 132 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 FAM215AQ9Y5M1 114 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 MGAQ8IWI9 3026 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 CUL9Q8IWT3 2517 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 TANC2Q9HCD6 1990 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 IGHV3OR16-13A0A075B7E8 117 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 TRAV9-2A0A087WT02 112 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 IGHV3-74A0A0B4J1X5 117 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 PPIAL4CA0A0B4J2A2 164 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 K7EM74 188 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 ORM1P02763 201 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 PPIAL4GP0DN37 164 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 CFHR2P36980 270 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 RIGQ13278 110 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 AARDQ4LEZ3 155 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 PLA2G2CQ5R387 149 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 SEM1Q6ZVN7 128 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 ZNF329Q86UD4 541 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 WFDC3Q8IUB2 231 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 ABHD17AQ96GS6 310 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 SCNM1Q9BWG6 230 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 NDUFA4L2Q9NRX3 87 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 HIF1ANQ9NWT6 349 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 KIAA1549Q9HCM3 1950 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 ZNF785A8K8V0 405 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 SCGB2A1O75556 95 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 LY6HO94772 140 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 IGLC2P0DOY2 106 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 IGLC3P0DOY3 106 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 PSG1P11464 419 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 SLC25A34Q6PIV7 304 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 C22orf34Q6ZV56 151 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 ASCL5Q7RTU5 278 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 S100A7AQ86SG5 101 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 PPP1R27Q86WC6 154 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 STPG4Q8N801 248 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 TMEM167AQ8TBQ9 72 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 IGFBPL1Q8WX77 278 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 ZNF503Q96F45 646 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 TIMD4Q96H15 378 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 AP5S1Q9NUS5 200 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 HSPB8Q9UJY1 196 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 PRSS46E5RG02 174 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 TMEM178BH3BS89 294 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 J3KRW8 73 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 M0R3E3 92 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 APOHP02749 345 aaPredicted RBP3.83□□□□□ -1.8
USP44-201ENST00000258499 FXYD7P58549 80 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 RBPMS2Q6ZRY4 209 aaKnown RBP3.83□□□□□ -1.8
USP44-201ENST00000258499 FAM57AQ8TBR7 257 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 RNASE6Q93091 150 aaKnown RBP3.83□□□□□ -1.8
USP44-201ENST00000258499 TMUB1Q9BVT8 246 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 TMEM133Q9H2Q1 129 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 MRPL36Q9P0J6 103 aaKnown RBP3.83□□□□□ -1.8
USP44-201ENST00000258499 RNF114Q9Y508 228 aa3.83□□□□□ -1.8
USP44-201ENST00000258499 IGLV3-9A0A075B6K5 115 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 CGB1A6NKQ9 187 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 LINC00614P0C842 121 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 FCER1GP30273 86 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 TSPOP30536 169 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 TMEM30BQ3MIR4 351 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 KMT2EQ8IZD2 1858 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 TNRC6AQ8NDV7 1962 aaKnown RBP3.82□□□□□ -1.8
USP44-201ENST00000258499 A0A0G2JNJ9 132 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 A0A1B0GUT8 65 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 ITGB1BP1O14713 200 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 LHBP01229 141 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 TCRAP04437 139 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 IGHV1-8P0DP01 117 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 NMUP48645 174 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 RPL11P62913 178 aaKnown RBP3.82□□□□□ -1.8
USP44-201ENST00000258499 MPV17L2Q567V2 206 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 TMEM116Q8NCL8 245 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 OR5AN1Q8NGI8 311 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 C1orf159Q96HA4 380 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 RITA1Q96K30 269 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 Q9UFV3 132 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 ZFP30Q9Y2G7 519 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 IGHV3-49A0A0A0MS15 119 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 SMIM27A0A1W2PRY6 76 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 FNDC10F2Z333 226 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 HLA-DRB1P01911 266 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 LIPFP07098 398 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 IGLL1P15814 213 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 GATA4P43694 442 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 TWIST1Q15672 202 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 POU2AF1Q16633 256 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 PATE2Q6UY27 113 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 C18orf15Q96N68 181 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 NDFIP1Q9BT67 221 aa3.82□□□□□ -1.8
USP44-201ENST00000258499 MUC3AQ02505 3323 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 IGHV3-66A0A0C4DH42 116 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 TMEM189A5PLL7 270 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 PRSS1P07477 247 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 LINC00310P59036 64 aa3.81□□□□□ -1.8
USP44-201ENST00000258499 ECSCRQ19T08 205 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms