RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 DLK1P80370 383 aa16.8■□□□□ 0.28
LSM4-201ENST00000252816 ARL16Q0P5N6 197 aa16.8■□□□□ 0.28
LSM4-201ENST00000252816 ACTL10Q5JWF8 245 aa16.8■□□□□ 0.28
LSM4-201ENST00000252816 GSG1LQ6UXU4 331 aa16.8■□□□□ 0.28
LSM4-201ENST00000252816 BPIFCQ8NFQ6 507 aa16.8■□□□□ 0.28
LSM4-201ENST00000252816 IL17DQ8TAD2 202 aa16.8■□□□□ 0.28
LSM4-201ENST00000252816 PPP1R14BQ96C90 147 aa16.8■□□□□ 0.28
LSM4-201ENST00000252816 SACSQ9NZJ4 4579 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 K7EPK0 472 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 IL5P05113 134 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 CYP2G1PQ6ZSU1 146 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 OR10P1Q8NGE3 313 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 ENKURQ8TC29 256 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 GATAD1Q8WUU5 269 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 C2orf50Q96LR7 162 aa16.79■□□□□ 0.28
LSM4-201ENST00000252816 SEPSECSQ9HD40 501 aaKnown RBP16.79■□□□□ 0.28
LSM4-201ENST00000252816 ORM2P19652 201 aa16.78■□□□□ 0.28
LSM4-201ENST00000252816 SNRPD3P62318 126 aaKnown RBP16.78■□□□□ 0.28
LSM4-201ENST00000252816 OR8I2Q8N0Y5 310 aa16.78■□□□□ 0.28
LSM4-201ENST00000252816 C11orf1Q9H5F2 150 aa16.78■□□□□ 0.28
LSM4-201ENST00000252816 BATF3Q9NR55 127 aa16.78■□□□□ 0.28
LSM4-201ENST00000252816 FBXL17Q9UF56 701 aa16.78■□□□□ 0.28
LSM4-201ENST00000252816 SLC45A2Q9UMX9 530 aa16.78■□□□□ 0.28
LSM4-201ENST00000252816 LSM5Q9Y4Y9 91 aaKnown RBP16.78■□□□□ 0.28
LSM4-201ENST00000252816 FNDC10F2Z333 226 aa16.77■□□□□ 0.28
LSM4-201ENST00000252816 OR1B1Q8NGR6 318 aa16.77■□□□□ 0.28
LSM4-201ENST00000252816 RARRES2Q99969 163 aa16.77■□□□□ 0.28
LSM4-201ENST00000252816 ZNF98A6NK75 572 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 L7N2F9 121 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 SOCS3O14543 225 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 C4BPBP20851 252 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 VAMP2P63027 116 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 IL15RAQ13261 267 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 NRARPQ7Z6K4 114 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 OR11H2Q8NH07 326 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 LYSTQ99698 3801 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 SLC25A32Q9H2D1 315 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 NPVFQ9HCQ7 196 aa16.76■□□□□ 0.27
LSM4-201ENST00000252816 SPP1P10451 314 aa16.75■□□□□ 0.27
LSM4-201ENST00000252816 C17orf77Q96MU5 243 aa16.75■□□□□ 0.27
LSM4-201ENST00000252816 TMEM147Q9BVK8 224 aa16.75■□□□□ 0.27
LSM4-201ENST00000252816 SLC25A22Q9H936 323 aa16.75■□□□□ 0.27
LSM4-201ENST00000252816 DOK5Q9P104 306 aa16.75■□□□□ 0.27
LSM4-201ENST00000252816 MGAT4CQ9UBM8 478 aa16.75■□□□□ 0.27
LSM4-201ENST00000252816 DEDDO75618 318 aa16.74■□□□□ 0.27
LSM4-201ENST00000252816 DEFB1P60022 68 aa16.74■□□□□ 0.27
LSM4-201ENST00000252816 SLC38A11Q08AI6 406 aa16.74■□□□□ 0.27
LSM4-201ENST00000252816 MORN3Q6PF18 240 aaPredicted RBP16.74■□□□□ 0.27
LSM4-201ENST00000252816 H3BMM0 161 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 LINC00869P0C866 280 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 BCAP31P51572 246 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 PLP1P60201 277 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 TEPPQ6URK8 271 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 LINC00052Q96N35 136 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 GGACTQ9BVM4 153 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 SCRT1Q9BWW7 348 aa16.73■□□□□ 0.27
LSM4-201ENST00000252816 FAM24AA6NFZ4 105 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 H3BRN7 92 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 ATF4P18848 351 aaPredicted RBP16.72■□□□□ 0.27
LSM4-201ENST00000252816 GALR1P47211 349 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 PSMB3P49720 205 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 CAV2P51636 162 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 S100A10P60903 97 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 SELENOTP62341 195 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 RAB32Q13637 225 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 GDF5OSQ5U4N7 250 aa16.72■□□□□ 0.27
LSM4-201ENST00000252816 SLC25A39Q9BZJ4 359 aaPredicted RBP16.72■□□□□ 0.27
LSM4-201ENST00000252816 GPN1Q9HCN4 374 aaPredicted RBP16.72■□□□□ 0.27
LSM4-201ENST00000252816 LCE6AA0A183 80 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 HYPMO75409 117 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 CST7O76096 145 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 HLA-DRB4P13762 266 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 ID1P41134 155 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 PMS2P11Q13670 270 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 SHANK2-AS3Q9BTD1 123 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 RSG1Q9BU20 258 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 CLEC5AQ9NY25 188 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 HIGD1AQ9Y241 93 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 HLA-DRB4X5D2U9 266 aa16.71■□□□□ 0.27
LSM4-201ENST00000252816 INMT-MINDY4F8WBC2 141 aa16.7■□□□□ 0.26
LSM4-201ENST00000252816 ISLRO14498 428 aa16.7■□□□□ 0.26
LSM4-201ENST00000252816 TMEM41BQ5BJD5 291 aa16.7■□□□□ 0.26
LSM4-201ENST00000252816 PATE2Q6UY27 113 aa16.7■□□□□ 0.26
LSM4-201ENST00000252816 AGPAT2O15120 278 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 SIX6O95475 246 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 OR5G3P0C626 314 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 PVALBP20472 110 aaPredicted RBP16.69■□□□□ 0.26
LSM4-201ENST00000252816 RAP2BP61225 183 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 TMEM217Q8N7C4 229 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 CSNK1G2-AS1Q8NCQ2 148 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 C20orf173Q96LM9 149 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 UHRF2Q96PU4 802 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 MGST2Q99735 147 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 MARVELD1Q9BSK0 173 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 ARL6Q9H0F7 186 aa16.69■□□□□ 0.26
LSM4-201ENST00000252816 C11orf68Q9H3H3 251 aaKnown RBP16.69■□□□□ 0.26
LSM4-201ENST00000252816 LYRM2Q9NU23 88 aaPredicted RBP16.69■□□□□ 0.26
LSM4-201ENST00000252816 IGSF23A1L1A6 192 aa16.68■□□□□ 0.26
LSM4-201ENST00000252816 CXorf65A6NEN9 183 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms