RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 C22orf15Q8WYQ4 148 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 C14orf144Q96I85 54 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 TRGV9Q99603 122 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 SRSF8Q9BRL6 282 aaKnown RBP6.24□□□□□ -1.41
CXCR4-201ENST00000241393 CHRDL1Q9BU40 450 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 PAXXQ9BUH6 204 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 FNDC4Q9H6D8 234 aaPredicted RBP6.24□□□□□ -1.41
CXCR4-201ENST00000241393 HIF1ANQ9NWT6 349 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 RALYQ9UKM9 306 aaKnown RBP6.24□□□□□ -1.41
CXCR4-201ENST00000241393 RP1L1Q8IWN7 2480 aaPredicted RBP6.24□□□□□ -1.41
CXCR4-201ENST00000241393 A0A1W2PPI3 338 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 SMIM27A0A1W2PRY6 76 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 IGLC7A0M8Q6 106 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 A8MWP6 167 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 E7EUB6 86 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 SLC17A3O00476 420 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 IGLV1-47P01700 117 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 CRISP2P16562 243 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 RPL27AP46776 148 aaKnown RBP6.23□□□□□ -1.41
CXCR4-201ENST00000241393 TPPP2P59282 170 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 PLP1P60201 277 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 RAB4BP61018 213 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 PRSS8Q16651 343 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 MRGPRG-AS1Q2M3A8 158 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 C8orf46Q8TAG6 207 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 NTN5Q8WTR8 489 aaPredicted RBP6.23□□□□□ -1.41
CXCR4-201ENST00000241393 PERPQ96FX8 193 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 ZNF355PQ9NSJ1 428 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 AMMECR1Q9Y4X0 333 aaPredicted RBP6.23□□□□□ -1.41
CXCR4-201ENST00000241393 ZGRF1Q86YA3 2104 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 IGHV2-26A0A0B4J1V2 119 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 FCN1O00602 326 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 PEX7O00628 323 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 HLA-DQA1P01909 254 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 RD3LP0DJH9 198 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 HNF1AP20823 631 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 CBLN1P23435 193 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 MYCNOSP40205 109 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 ADORA2A-AS1P86434 159 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 DIAPH2-AS1Q14236 149 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 OR10J3Q5JRS4 329 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 C10orf55Q5SWW7 151 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 IBA57Q5T440 356 aaKnown RBP6.23□□□□□ -1.41
CXCR4-201ENST00000241393 PATE2Q6UY27 113 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 OR8I2Q8N0Y5 310 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 ZNF664Q8N3J9 261 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 MS4A10Q96PG2 267 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 NDUFAF3Q9BU61 184 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 CLEC7AQ9BXN2 247 aa6.23□□□□□ -1.41
CXCR4-201ENST00000241393 LOC400499M0QZD8 3231 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 IZUMO1RA6ND01 250 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 ZNF705GA8MUZ8 300 aaPredicted RBP6.22□□□□□ -1.41
CXCR4-201ENST00000241393 SNURFLB1AK76 121 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 GNLYP22749 145 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 IER3P46695 156 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 OR5I1Q13606 314 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 TMEM183BQ1AE95 376 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 ZNF329Q86UD4 541 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 TMEM256Q8N2U0 113 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 FXYD5Q96DB9 178 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 RBM14Q96PK6 669 aaKnown RBP6.22□□□□□ -1.41
CXCR4-201ENST00000241393 PRO1933Q9H354 126 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 TNFRSF19Q9NS68 423 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 SH3BGRL2Q9UJC5 107 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 SIGLEC9Q9Y336 463 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 PTPRZ1P23471 2315 aaPredicted RBP6.22□□□□□ -1.41
CXCR4-201ENST00000241393 ACACAQ13085 2346 aa6.22□□□□□ -1.41
CXCR4-201ENST00000241393 TRAV5A0A0B4J249 113 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 IGHV1-3A0A0C4DH29 117 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 KIR2DL5BA0A0G2JN68 375 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 KIR2DL5BA0A0G2JPC4 375 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 BUB1B-PAK6H3BSN5 160 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 DSPP15924 2871 aaKnown RBP6.21□□□□□ -1.42
CXCR4-201ENST00000241393 CA7P43166 264 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 C1orf194Q5T5A4 169 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF841Q6ZN19 808 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 KIR2DL5AQ8N109 375 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 LINC00469Q8N7U9 141 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 ST6GALNAC3Q8NDV1 305 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 RNASE7Q9H1E1 156 aaKnown RBP6.21□□□□□ -1.42
CXCR4-201ENST00000241393 NAGKQ9UJ70 344 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 TP53TG3Q9ULZ0 132 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 KLF12Q9Y4X4 402 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 INSIG2Q9Y5U4 225 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 F11RQ9Y624 299 aaKnown RBP6.21□□□□□ -1.42
CXCR4-201ENST00000241393 ARFGEF3Q5TH69 2177 aa6.21□□□□□ -1.42
CXCR4-201ENST00000241393 ENSAO43768 121 aaKnown RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 NUPR1O60356 82 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 HYPMO75409 117 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 REG1AP05451 166 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 HIST1H1EP10412 219 aaKnown RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 MGST1P10620 155 aaKnown RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 BRS3P32247 399 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 LINC00305Q7Z4B0 112 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 MRPL52Q86TS9 123 aaKnown RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 PPP1R27Q86WC6 154 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 BAGE2Q86Y30 109 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms