RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 USP9YO00507 2555 aaPredicted RBP12.43□□□□□ -0.42
CTSD-201ENST00000236671 HYPMO75409 117 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 TMEM155Q4W5P6 130 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 HCP5Q6MZN7 132 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 ATP5L2Q7Z4Y8 100 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 BLNKQ8WV28 456 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 SMIM12Q96EX1 92 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 SGK494Q96LW2 274 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 SSBP4Q9BWG4 385 aaPredicted RBP12.43□□□□□ -0.42
CTSD-201ENST00000236671 CLEC7AQ9BXN2 247 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 WNT10AQ9GZT5 417 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 MC5RP33032 325 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 GPR6P46095 362 aaPredicted RBP12.43□□□□□ -0.42
CTSD-201ENST00000236671 ETFRF1Q6IPR1 90 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 LHFPL4Q7Z7J7 247 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 TRGV9Q99603 122 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 MLST8Q9BVC4 326 aa12.43□□□□□ -0.42
CTSD-201ENST00000236671 HRNRQ86YZ3 2850 aaPredicted RBP12.42□□□□□ -0.42
CTSD-201ENST00000236671 PGPA6NDG6 321 aa12.42□□□□□ -0.42
CTSD-201ENST00000236671 NPSP0C0P6 89 aa12.42□□□□□ -0.42
CTSD-201ENST00000236671 CAMPP49913 170 aa12.42□□□□□ -0.42
CTSD-201ENST00000236671 LCN12Q6JVE5 192 aa12.42□□□□□ -0.42
CTSD-201ENST00000236671 GPR82Q96P67 336 aa12.42□□□□□ -0.42
CTSD-201ENST00000236671 DOPEY1Q5JWR5 2465 aa12.42□□□□□ -0.42
CTSD-201ENST00000236671 IGHV3-72A0A0B4J1Y9 119 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 FAM181BA6NEQ2 426 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 HSBP1O75506 76 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 IGHV1-8P0DP01 117 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 GP9P14770 177 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 LGALS7P47929 136 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 MMDQ15546 238 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 COL5A1-AS1Q5SY13 56 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 GOLT1BQ9Y3E0 138 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 NBEAP1P0C6P0 100 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 CA7P43166 264 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 CDSNQ15517 529 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 LINC00322Q6ZN03 302 aaPredicted RBP12.41□□□□□ -0.42
CTSD-201ENST00000236671 C11orf42Q8N5U0 333 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 RPH3ALQ9UNE2 315 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 ZNF835Q9Y2P0 537 aa12.41□□□□□ -0.42
CTSD-201ENST00000236671 M0R2Z0 102 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 ENSAO43768 121 aaKnown RBP12.4□□□□□ -0.42
CTSD-201ENST00000236671 TFPI2P48307 235 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 MAJINQ3KP22 176 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 Q6ZN92 141 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 TCF24Q7RTU0 167 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 ATOH7Q8N100 152 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 TEX45Q8NA69 505 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 TMEM116Q8NCL8 245 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 PRSS22Q9GZN4 317 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
CTSD-201ENST00000236671 KAAG1Q9UBP8 84 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 ROS1P08922 2347 aa12.4□□□□□ -0.42
CTSD-201ENST00000236671 TOMM40O96008 361 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 LTAP01374 205 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 CRYGBP07316 175 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 RNASEKQ6P5S7 137 aaKnown RBP12.4□□□□□ -0.43
CTSD-201ENST00000236671 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 OR8B3Q8NGG8 313 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 C22orf15Q8WYQ4 148 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 FMC1Q96HJ9 113 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 URB1-AS1Q96HZ7 61 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 OR8B2Q96RD0 313 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 TXN2Q99757 166 aa12.4□□□□□ -0.43
CTSD-201ENST00000236671 PLXNB1O43157 2135 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 PRRG2O14669 202 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 APELAP0DMC3 54 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 CNTFRP26992 372 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 RPL27AP46776 148 aaKnown RBP12.39□□□□□ -0.43
CTSD-201ENST00000236671 HNRNPA3P51991 378 aaKnown RBP12.39□□□□□ -0.43
CTSD-201ENST00000236671 HBBP68871 147 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 PMCHL1Q16048 86 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 CT83Q5H943 113 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 PRR31Q5SQ13 230 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 KLHDC1Q8N7A1 406 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 GTSF1Q8WW33 167 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 TMEM133Q9H2Q1 129 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 HECTD1Q9ULT8 2610 aa12.39□□□□□ -0.43
CTSD-201ENST00000236671 IGHV3-21A0A0B4J1V1 117 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 C2orf70A6NJV1 201 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 CCL21O00585 134 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 CYB5R2Q6BCY4 276 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 OR2D3Q8NGH3 330 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 RNASE6Q93091 150 aaKnown RBP12.38□□□□□ -0.43
CTSD-201ENST00000236671 ZNF492Q9P255 531 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 PTPN13Q12923 2485 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 H3BTX0 84 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 TCRAP04437 139 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 PLP1P60201 277 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 PAX2Q02962 417 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 SRSF1Q07955 248 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTSD-201ENST00000236671 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 STPG4Q8N801 248 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 Q9H3A6 140 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 JKAMPQ9P055 326 aa12.38□□□□□ -0.43
CTSD-201ENST00000236671 LAMTOR2Q9Y2Q5 125 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms