RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 IGKV1-27A0A075B6S5 117 aa5.91□□□□□ -1.46
CPS1-201ENST00000233072 MYMXA0A1B0GTQ4 84 aa5.91□□□□□ -1.46
CPS1-201ENST00000233072 H0YIZ8 118 aa5.91□□□□□ -1.46
CPS1-201ENST00000233072 CD33P20138 364 aa5.91□□□□□ -1.46
CPS1-201ENST00000233072 CITED2Q99967 270 aaPredicted RBP5.91□□□□□ -1.46
CPS1-201ENST00000233072 IGKV2-40A0A087WW87 121 aaPredicted RBP5.9□□□□□ -1.46
CPS1-201ENST00000233072 TRAV5A0A0B4J249 113 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 LEPROTO15243 131 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 NDUFS6O75380 124 aaKnown RBP5.9□□□□□ -1.46
CPS1-201ENST00000233072 IGKV2D-40P01614 121 aaPredicted RBP5.9□□□□□ -1.46
CPS1-201ENST00000233072 LINC00158P58513 81 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 QRFPP83859 136 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 Q0VFX4 171 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 FOXF2Q12947 444 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 TRPT1Q86TN4 253 aaKnown RBP5.9□□□□□ -1.46
CPS1-201ENST00000233072 ZNF319Q9P2F9 582 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 PMVKQ15126 192 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 SS18Q15532 418 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
CPS1-201ENST00000233072 Q6ZS92 163 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 DLX4Q92988 240 aaPredicted RBP5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 SHANK2-AS3Q9BTD1 123 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 RSPO3Q9BXY4 272 aaPredicted RBP5.9□□□□□ -1.46
CPS1-201ENST00000233072 EDA2RQ9HAV5 297 aa5.9□□□□□ -1.46
CPS1-201ENST00000233072 FAM231BA6NCW3 169 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 VWC2LB2RUY7 222 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 ST6GALNAC6Q969X2 333 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 MCRIP2Q9BUT9 160 aaKnown RBP5.9□□□□□ -1.47
CPS1-201ENST00000233072 SIGLEC9Q9Y336 463 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 MUC21A0A0G2JKD1 596 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 MUC21A0A140T8X8 626 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 RHODO00212 210 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 EFNA2O43921 213 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 UBE2V1Q13404 147 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 KLF17Q5JT82 389 aaPredicted RBP5.9□□□□□ -1.47
CPS1-201ENST00000233072 C1orf194Q5T5A4 169 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 Q86TA4 180 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 DOCK4Q8N1I0 1966 aa5.9□□□□□ -1.47
CPS1-201ENST00000233072 CD55P08174 381 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 EVI2AP22794 236 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 SRSF2Q01130 221 aaKnown RBP5.89□□□□□ -1.47
CPS1-201ENST00000233072 NEGR1Q7Z3B1 354 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 HIST3H2BBQ8N257 126 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 SCRT1Q9BWW7 348 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 DAZ1Q9NQZ3 744 aaKnown RBP5.89□□□□□ -1.47
CPS1-201ENST00000233072 SBF1O95248 1867 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 IGKV1D-8A0A087WSZ0 117 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 D6R8Y8 96 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 MST1P26927 711 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 GATA4P43694 442 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 LCN12Q6JVE5 192 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 LYZL1Q6UWQ5 148 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 UNQ6494/PRO21346Q6UXR6 183 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 ZNF48Q96MX3 618 aaPredicted RBP5.89□□□□□ -1.47
CPS1-201ENST00000233072 VSIRQ9H7M9 311 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 YPEL3P61236 119 aaPredicted RBP5.89□□□□□ -1.47
CPS1-201ENST00000233072 PKIGQ9Y2B9 76 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 IGKV1-5P01602 117 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 ZNF474Q6S9Z5 364 aaPredicted RBP5.89□□□□□ -1.47
CPS1-201ENST00000233072 CST9LQ9H4G1 147 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 PRTN3P24158 256 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 UBE2E1P51965 193 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 SRSF3P84103 164 aaKnown RBP5.89□□□□□ -1.47
CPS1-201ENST00000233072 C9orf153Q5TBE3 101 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 LINC01551Q86U37 167 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 BOD1L2Q8IYS8 172 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 CHD5Q8TDI0 1954 aa5.89□□□□□ -1.47
CPS1-201ENST00000233072 GOLGA4Q13439 2230 aaKnown RBP5.88□□□□□ -1.47
CPS1-201ENST00000233072 PMS2P5A8MQ11 134 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 LINC01619G3V211 115 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 GNLYP22749 145 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 IL17RELQ6ZVW7 336 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 A0A087WX48 190 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 ETV2O00321 342 aaPredicted RBP5.88□□□□□ -1.47
CPS1-201ENST00000233072 RNASE2P10153 161 aaKnown RBP5.88□□□□□ -1.47
CPS1-201ENST00000233072 ZNF833PQ6ZTB9 187 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 SPINK8P0C7L1 97 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 ANAPC10Q9UM13 185 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 KLF12Q9Y4X4 402 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 H3BUA1 57 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 SNAI2O43623 268 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 HIST1H4AP62805 103 aaKnown RBP5.88□□□□□ -1.47
CPS1-201ENST00000233072 PIP4P2Q8N4L2 257 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 HIST1H2BLQ99880 126 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 CHAC1Q9BUX1 264 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 SCN3AQ9NY46 2000 aa5.88□□□□□ -1.47
CPS1-201ENST00000233072 IGKV1D-17A0A075B6S4 117 aa5.87□□□□□ -1.47
CPS1-201ENST00000233072 H3BUX3 64 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms