RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 GLRX5Q86SX6 157 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 C14orf144Q96I85 54 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 PARD6GQ9BYG4 376 aaPredicted RBP15.49■□□□□ 0.07
SMPD3-201ENST00000219334 SCN8AQ9UQD0 1980 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 UBE2E2Q96LR5 201 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 KLHDC3Q9BQ90 382 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 MED12Q93074 2177 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 TRAV12-3A0A0B4J271 114 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 BEND2Q8NDZ0 799 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 EVI2AP22794 236 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 IFITM2Q01629 132 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 MAPK1IP1LQ8NDC0 245 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 IGHV3-53P01767 116 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 OCC1Q8TAD7 63 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 TSKUQ8WUA8 353 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 EXOC3-AS1Q8N2X6 119 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 PRDM13Q9H4Q3 707 aa15.48■□□□□ 0.07
SMPD3-201ENST00000219334 FXYD7P58549 80 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 ZNF876PQ49A33 203 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 GFI1Q99684 422 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 DAZ1Q9NQZ3 744 aaKnown RBP15.47■□□□□ 0.07
SMPD3-201ENST00000219334 IGHV3-73A0A0B4J1V6 119 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 UBE2E1P51965 193 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 HGFACQ04756 655 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 DPM2O94777 84 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 PLNP26678 52 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 SYNJ2BPP57105 145 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 Q6P435 159 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 TRAV3A0A0B4J244 114 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 H0YIZ8 118 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 LY6G6FQ5SQ64 297 aa15.47■□□□□ 0.07
SMPD3-201ENST00000219334 TRBV6-6A0A0A6YYG2 114 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 LINC00158P58513 81 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 OVOL3O00110 214 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 TNFSF13O75888 250 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 STAG3L3P0CL85 134 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 PRB4P10163 310 aaPredicted RBP15.46■□□□□ 0.07
SMPD3-201ENST00000219334 RUSC1-AS1Q66K80 236 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 PDCD11Q14690 1871 aaKnown RBP15.46■□□□□ 0.07
SMPD3-201ENST00000219334 LINC00614P0C842 121 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 S100A7L2Q5SY68 101 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 ST6GALNAC6Q969X2 333 aa15.46■□□□□ 0.07
SMPD3-201ENST00000219334 CHTOPQ9Y3Y2 248 aaKnown RBP15.46■□□□□ 0.07
SMPD3-201ENST00000219334 CACNA1HO95180 2353 aa15.46■□□□□ 0.06
SMPD3-201ENST00000219334 USF3Q68DE3 2245 aa15.46■□□□□ 0.06
SMPD3-201ENST00000219334 TDGF1P3P51864 188 aa15.46■□□□□ 0.06
SMPD3-201ENST00000219334 MORN3Q6PF18 240 aaPredicted RBP15.46■□□□□ 0.06
SMPD3-201ENST00000219334 CTAG1AP78358 180 aa15.45■□□□□ 0.06
SMPD3-201ENST00000219334 CR1LQ2VPA4 569 aa15.45■□□□□ 0.06
SMPD3-201ENST00000219334 MBD3L1Q8WWY6 194 aa15.45■□□□□ 0.06
SMPD3-201ENST00000219334 BTCP35070 178 aa15.45■□□□□ 0.06
SMPD3-201ENST00000219334 NBL1P41271 181 aa15.45■□□□□ 0.06
SMPD3-201ENST00000219334 LHFPL1Q86WI0 220 aa15.45■□□□□ 0.06
SMPD3-201ENST00000219334 C5orf63A6NC05 138 aa15.45■□□□□ 0.06
SMPD3-201ENST00000219334 PLA2G2CQ5R387 149 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 OR5A1Q8NGJ0 315 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 FREM3P0C091 2139 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 IGHV1-69DA0A0B4J2H0 117 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 PGPEP1LA6NFU8 196 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 LDLRAD4O15165 306 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 SERF1AO75920 110 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 IGHV1-69P01742 117 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 RFNGQ9Y644 331 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 PKDREJQ9NTG1 2253 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 A0A0U1RRA0 63 aa15.44■□□□□ 0.06
SMPD3-201ENST00000219334 C10orf126Q8N4M7 172 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 SRSF8Q9BRL6 282 aaKnown RBP15.43■□□□□ 0.06
SMPD3-201ENST00000219334 A0A1B0GWB2 263 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 TCRAP04437 139 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 ATP5L2Q7Z4Y8 100 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 JPT2Q9H910 190 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 NRN1Q9NPD7 142 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 LINC00473A8K010 186 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 IGKV1-5P01602 117 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 LCN12Q6JVE5 192 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 VSIRQ9H7M9 311 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 WFDC1Q9HC57 220 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 DEFB130BP0DP73 79 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 DEFB130AP0DP74 79 aa15.43■□□□□ 0.06
SMPD3-201ENST00000219334 SPATA31B1PQ5VZV4 182 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 FOXL2NBQ6ZUU3 175 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 CST9LQ9H4G1 147 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 TRAV2A0A0B4J234 112 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 TOMM40O96008 361 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 RPRMLQ8N4K4 120 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 PHLDA1Q8WV24 401 aaPredicted RBP15.42■□□□□ 0.06
SMPD3-201ENST00000219334 DEFB131AP59861 70 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 DMRT1Q9Y5R6 373 aa15.42■□□□□ 0.06
SMPD3-201ENST00000219334 PI4KAP42356 2102 aa15.41■□□□□ 0.06
SMPD3-201ENST00000219334 PAX2Q02962 417 aa15.41■□□□□ 0.06
SMPD3-201ENST00000219334 MGST2Q99735 147 aa15.41■□□□□ 0.06
SMPD3-201ENST00000219334 ADMP35318 185 aa15.41■□□□□ 0.06
SMPD3-201ENST00000219334 HEATR1Q9H583 2144 aaKnown RBP15.41■□□□□ 0.06
SMPD3-201ENST00000219334 LINC00587B1AMM8 73 aa15.41■□□□□ 0.06
SMPD3-201ENST00000219334 CA1P00915 261 aaPredicted RBP15.41■□□□□ 0.06
SMPD3-201ENST00000219334 ZNF562Q6V9R5 426 aa15.41■□□□□ 0.06
SMPD3-201ENST00000219334 C11orf68Q9H3H3 251 aaKnown RBP15.41■□□□□ 0.06
SMPD3-201ENST00000219334 LAGE3Q14657 143 aa15.41■□□□□ 0.06
SMPD3-201ENST00000219334 GZMBP10144 247 aa15.4■□□□□ 0.06
SMPD3-201ENST00000219334 TMEM249Q2WGJ8 235 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms