RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 RUSC1-AS1Q66K80 236 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 MTURNQ8N3F0 131 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 RPP25LQ8N5L8 163 aaKnown RBP11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 COPS9Q8WXC6 57 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 SH2D1AO60880 128 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 GNLYP22749 145 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 COL8A2P25067 703 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 ERVK11-1P61568 191 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 NUP35Q8NFH5 326 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 RNASE6Q93091 150 aaKnown RBP11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 PAPPA-AS1Q5QFB9 102 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 IFI27L1Q96BM0 104 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 WNT2P09544 360 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 LINC00271P0C7V0 271 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 PRR30Q53SZ7 412 aaPredicted RBP11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 A0A0G2JNJ9 132 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 ADARB2-AS1A8MUL3 147 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 CD59P13987 128 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 Q9UFV3 132 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 HEATR1Q9H583 2144 aaKnown RBP11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 GUSBP1Q15486 140 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 IGLV3-12A0A075B6K2 115 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 CD5P06127 495 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 PAX1P15863 534 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 DUX4L9Q6RFH8 374 aaPredicted RBP11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 C14orf178Q8N769 122 aaPredicted RBP11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 ORAOV1Q8WV07 137 aa11.15□□□□□ -0.62
TGFBR3-201ENST00000212355 TRAV8-4A0A0B4J246 113 aa11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 RBMY1BA6NDE4 496 aaKnown RBP11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 RBMY1EA6NEQ0 496 aaKnown RBP11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 RBMY1DP0C7P1 496 aaKnown RBP11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 TSKUQ8WUA8 353 aa11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 C5orf30Q96GV9 206 aa11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 PEMTQ9UBM1 199 aa11.15□□□□□ -0.63
TGFBR3-201ENST00000212355 HELZP42694 1942 aaKnown RBP11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 ADCYAP1P18509 176 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 TMEM30BQ3MIR4 351 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 LTBP1Q14766 1721 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 PLXND1Q9Y4D7 1925 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 IGHV1-8P0DP01 117 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 ZFP36L1Q07352 338 aaKnown RBP11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 OSTCQ9NRP0 149 aa11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
TGFBR3-201ENST00000212355 CEP250Q9BV73 2442 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 J3QW42 95 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 ATP5L2Q7Z4Y8 100 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 CACNA1EQ15878 2313 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 IGLV3-19P01714 112 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 TDGF1P3P51864 188 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 PVRIGQ6DKI7 326 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 Q6ZRM9 215 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 Q71RC1 249 aaPredicted RBP11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 CYSLTR1Q9Y271 337 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 LOC102723996A0A087X1L8 192 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 LAGE3Q14657 143 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 TRGV1A0A0A0MS02 117 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 LINC01551Q86U37 167 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 IGHV3-16A0A0C4DH30 117 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 KNCNA6PVL3 124 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 AMN1Q8IY45 258 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 OR9G4Q8NGQ1 327 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 WDR83OSQ9Y284 106 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 SLC25A15Q9Y619 301 aa11.13□□□□□ -0.63
TGFBR3-201ENST00000212355 DOCK11Q5JSL3 2073 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 H3BUX3 64 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 DOCK8Q8NF50 2099 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 C9JQL5 133 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 STPG4Q8N801 248 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 ZNF479Q96JC4 524 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 GAFA1Q96PS6 74 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 HIST1H4AP62805 103 aaKnown RBP11.12□□□□□ -0.63
TGFBR3-201ENST00000212355 TCF20Q9UGU0 1960 aaKnown RBP11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 IGKV1D-17A0A075B6S4 117 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 PRSS22Q9GZN4 317 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 H0YJW9 148 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 TMEM178BH3BS89 294 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 MYO7BQ6PIF6 2116 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 MPV17L2Q567V2 206 aa11.11□□□□□ -0.63
TGFBR3-201ENST00000212355 LHFPL1Q86WI0 220 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
TGFBR3-201ENST00000212355 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms