RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 CLRN3Q8NCR9 226 aa8.48□□□□□ -1.05
NME1-201ENST00000013034 OR10G9Q8NGN4 311 aa8.48□□□□□ -1.05
NME1-201ENST00000013034 OR10G7Q8NGN6 311 aa8.48□□□□□ -1.05
NME1-201ENST00000013034 MAP1LC3BQ9GZQ8 125 aa8.48□□□□□ -1.05
NME1-201ENST00000013034 NDUFA4L2Q9NRX3 87 aa8.48□□□□□ -1.05
NME1-201ENST00000013034 METTL1Q9UBP6 276 aaKnown RBP8.48□□□□□ -1.05
NME1-201ENST00000013034 VAX2Q9UIW0 290 aa8.48□□□□□ -1.05
NME1-201ENST00000013034 PRELID1Q9Y255 219 aa8.48□□□□□ -1.05
NME1-201ENST00000013034 TEX50A0A1B0GTY4 177 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 LOC102723971A0A1B0GUV8 181 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 SMCO3A2RU48 225 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 B4DEV8 164 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 CORTO00230 105 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 SLC25A17O43808 307 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 MT-CO2P00403 227 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 RPL29P47914 159 aaKnown RBP8.47□□□□□ -1.05
NME1-201ENST00000013034 SRSF3P84103 164 aaKnown RBP8.47□□□□□ -1.05
NME1-201ENST00000013034 PNRC1Q12796 327 aaPredicted RBP8.47□□□□□ -1.05
NME1-201ENST00000013034 PSG5Q15238 335 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 FFAR4Q5NUL3 377 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 SLC35E1Q96K37 410 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 TMEM231Q9H6L2 316 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 SMCO4Q9NRQ5 59 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 ZNF355PQ9NSJ1 428 aa8.47□□□□□ -1.05
NME1-201ENST00000013034 TRAV3A0A0B4J244 114 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 SRRM4A7MD48 611 aaKnown RBP8.46□□□□□ -1.06
NME1-201ENST00000013034 ACTL6BO94805 426 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 BRI3O95415 125 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 CSN3P07498 182 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 CDC34P49427 236 aaPredicted RBP8.46□□□□□ -1.06
NME1-201ENST00000013034 CD81P60033 236 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 TMEM144Q7Z5S9 345 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 ZNF114Q8NC26 417 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 RNF2Q99496 336 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
NME1-201ENST00000013034 FRAS1Q86XX4 4008 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 A0A1W2PPV4 95 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 TMEM250H0YL14 139 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 SCO1O75880 301 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 IGLV2-23P01705 113 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 SRP19P09132 144 aaKnown RBP8.45□□□□□ -1.06
NME1-201ENST00000013034 ELLP55199 621 aaPredicted RBP8.45□□□□□ -1.06
NME1-201ENST00000013034 ICAM4Q14773 271 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 FXYD3Q14802 87 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 GUCA2BQ16661 112 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 RPEL1Q2QD12 228 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 ZNF343Q6P1L6 599 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 RPP25LQ8N5L8 163 aaKnown RBP8.45□□□□□ -1.06
NME1-201ENST00000013034 OR1L6Q8NGR2 347 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 TMEM190Q8WZ59 177 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 TMEM68Q96MH6 324 aa8.45□□□□□ -1.06
NME1-201ENST00000013034 PEF1Q9UBV8 284 aaKnown RBP8.45□□□□□ -1.06
NME1-201ENST00000013034 PCLOQ9Y6V0 5065 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 A0A087WWC5 75 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 IZUMO1RA6ND01 250 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
NME1-201ENST00000013034 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
NME1-201ENST00000013034 DNASE2O00115 360 aaPredicted RBP8.44□□□□□ -1.06
NME1-201ENST00000013034 CNIH1O95406 144 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 CXorf1O96002 111 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
NME1-201ENST00000013034 RNASE2P10153 161 aaKnown RBP8.44□□□□□ -1.06
NME1-201ENST00000013034 RHOBP62745 196 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 SPINK9Q5DT21 86 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 LCN15Q6UWW0 184 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 USMG5Q96IX5 58 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 GGTLC1Q9BX51 225 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 HINT2Q9BX68 163 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 SRD5A3Q9H8P0 318 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 GNG13Q9P2W3 67 aa8.44□□□□□ -1.06
NME1-201ENST00000013034 CXorf65A6NEN9 183 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 C9JQL5 133 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 PDE6DO43924 150 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 LY6G6CO95867 125 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 CRYGBP07316 175 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 B2MP61769 119 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 SELENOTP62341 195 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 CCL20P78556 96 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 SSBP2P81877 361 aaPredicted RBP8.43□□□□□ -1.06
NME1-201ENST00000013034 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
NME1-201ENST00000013034 ZNF726P1Q15940 193 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 PRSS8Q16651 343 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 PVRIGQ6DKI7 326 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 C15orf54Q8N8G6 183 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 TMEM170AQ8WVE7 144 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 TVP23CQ96ET8 276 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 MGST2Q99735 147 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 ZNF430Q9H8G1 570 aaPredicted RBP8.43□□□□□ -1.06
NME1-201ENST00000013034 PXMP4Q9Y6I8 212 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 TNCP24821 2201 aa8.43□□□□□ -1.06
NME1-201ENST00000013034 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
NME1-201ENST00000013034 F6UZH7 168 aa8.42□□□□□ -1.06
NME1-201ENST00000013034 CLN5O75503 358 aa8.42□□□□□ -1.06
NME1-201ENST00000013034 TRBV12-3P01733 135 aa8.42□□□□□ -1.06
NME1-201ENST00000013034 RPL27AP46776 148 aaKnown RBP8.42□□□□□ -1.06
NME1-201ENST00000013034 TAS2R45P59539 299 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms