RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 BokO35425 213 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Acot1O55137 419 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 P01641 117 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ly6aP05533 134 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ccl11P48298 97 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Smrp1Q2MH31 260 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm5460Q3UQ97 254 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr3Q60879 313 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Defb34Q7TNV8 81 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr1386Q7TQT0 309 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr1178Q7TR20 323 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Zfp719Q8BIV1 735 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 CenpxQ8C4X1 78 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fam169bQ8CHT6 337 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mmgt2Q8R3L0 123 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr103Q920Y8 313 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ncbp2Q9CQ49 156 aaKnown RBP7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fmc1Q9CR13 113 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem239Q9DA47 151 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Cml1Q9JIZ0 222 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mfap5Q9QZJ6 164 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ccl17F6R5P4 103 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 AipO08915 330 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Socs1O35716 212 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 EhfO70273 300 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Iglc3P01845 104 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tacr3P47937 452 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Rnd3P61588 244 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 EcscrQ3TZW0 214 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tas2r113Q7M711 309 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Duxbl2Q7TNE6 350 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr1509Q7TQQ0 308 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 C130079G13RikQ8BUY2 280 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fam24aQ8CF27 98 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ifi205aQ8CGE8 404 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 MepeQ8K4L6 441 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 RbksQ8R1Q9 323 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Sult5a1Q91X36 291 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Alpk2Q91ZB0 2144 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fxyd6Q9D164 94 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ldb3Q9JKS4 723 aaKnown RBP7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 AgtrapQ9WVK0 161 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Dpm2Q9Z324 84 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 EXOC1LB9EK06 172 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Omt2bD3YX29 119 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm10719E9Q7T3 227 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm43191F6YIH5 235 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 OpcmlG5E8G3 345 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm14496K7N5U4 849 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 LifP09056 203 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 S100a11P50543 98 aaKnown RBP7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Psmb7P70195 277 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr429Q7TRW1 312 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr403Q7TRX2 313 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr309Q7TS01 308 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Rbm11Q80YT9 238 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Rbm22Q8BHS3 420 aaKnown RBP7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ovol2Q8CIV7 274 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Pttg1ipQ8R143 174 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 AdigQ8R400 80 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr303Q8VFP0 319 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr975Q8VG91 310 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mrps14Q9CR88 128 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 2900055J20RikQ9D6G3 140 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mfsd4b2Q9D8I5 366 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tex43Q9D9I1 141 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem9bQ9JJR8 199 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ak4Q9WUR9 223 aaKnown RBP7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Zfp236S4R299 1847 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ighv1-26A0A075B5V0 117 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Trav3n-3A0A0G2JEM0 114 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Aadacl4B1AVU5 407 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm5475D3YV11 175 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm20821J3QPJ2 227 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Rpl36P47964 105 aaKnown RBP7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gadd45aP48316 165 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fgf1P61148 155 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ctf2P83714 204 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Cfc1P97766 202 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem88bQ3TYP4 173 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm10803Q3TZS6 135 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Cd200r1lQ6XJV6 249 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mogat2Q80W94 334 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Slc25a44Q8BGF9 314 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 RybpQ8CCI5 228 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 4933402N03RikQ8CDT9 329 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Rasl10aQ8K5A4 203 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tmem150bQ8R218 238 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Sco2Q8VCL2 255 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ube2tQ9CQ37 204 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Tnfrsf19Q9JLL3 416 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Edf1Q9JMG1 148 aaKnown RBP7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 H2-OaQ9QWV1 250 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Eif3iQ9QZD9 325 aaKnown RBP7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ppp1r17Q9Z2E4 159 aa7.38□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Col27a1Q5QNQ9 1845 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm4064A0A087WR82 380 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm19935A0A1B0GSF9 52 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm5485A0A1D5RM98 91 aa7.37□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr177E9Q7W1 309 aa7.37□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms