RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	EIF2B2	P49770	351 aa	Known RBP	11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	ZNF124	Q15973	351 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	SPANXN5	Q5MJ07	72 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	CASC10	Q5T4H9	136 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	C16orf54	Q6UWD8	224 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	STXBP6	Q8NFX7	210 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	OR51G1	Q8NGK1	321 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	OVOL2	Q9BRP0	275 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	TRAV6	A0A075B6T7	132 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	HELT	A6NFD8	242 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	PRSS46	E5RG02	174 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939		H3BP45	60 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	FABP1	P07148	127 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	POLR2G	P62487	172 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	ZNF90	Q03938	601 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939		Q6ZWC4	215 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	STPG3	Q8N7X2	389 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	GLMP	Q8WWB7	406 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	RNF125	Q96EQ8	232 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	NUDT15	Q9NV35	164 aa		11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	STRAP	Q9Y3F4	350 aa	Known RBP	11.11	□□□□□ -0.63
PHGDH-231	ENST00000641939	TENM2	Q9NT68	2774 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939		K7EQG2	157 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	SSSCA1	O60232	199 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	AP2S1	P53680	142 aa	Predicted RBP	11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	DEFB131A	P59861	70 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	IAH1	Q2TAA2	248 aa	Predicted RBP	11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	FAM24B	Q8N5W8	94 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	THAP8	Q8NA92	274 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	TRGV9	Q99603	122 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	PBDC1	Q9BVG4	233 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	PSENEN	Q9NZ42	101 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	PFDN2	Q9UHV9	154 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	TP53TG1	Q9Y2A0	90 aa		11.1	□□□□□ -0.63
PHGDH-231	ENST00000641939	FAM240B	A0A1B0GVZ2	78 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	SPRY2	O43597	315 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	BUB3	O43684	328 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	NUP62	P37198	522 aa	Predicted RBP	11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	DEFB135	Q30KP9	77 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	OR8G2P	Q6IF36	304 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	MZT2B	Q6NZ67	158 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	DCANP1	Q8TF63	244 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	SMIM8	Q96KF7	97 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	WDR12	Q9GZL7	423 aa	Known RBP	11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	PTTG2	Q9NZH5	202 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	TBC1D24	Q9ULP9	559 aa		11.09	□□□□□ -0.63
PHGDH-231	ENST00000641939	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	IGKV1OR2-108	A0A075B7D4	117 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	SNRPGP15	A8MWD9	76 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	SCGB1D2	O95969	90 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	H2AFB2	P0C5Z0	115 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	LYZ	P61626	148 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	ASAH1	Q13510	395 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	OR2F1	Q13607	317 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	LEMD1	Q68G75	181 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	ZFAND6	Q6FIF0	208 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	SIGLEC15	Q6ZMC9	328 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	ZNF431	Q8TF32	576 aa	Predicted RBP	11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	SEC22C	Q9BRL7	303 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	CSTL1	Q9H114	145 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	GSKIP	Q9P0R6	139 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	LYST	Q99698	3801 aa		11.08	□□□□□ -0.64
PHGDH-231	ENST00000641939	ZNF688	P0C7X2	276 aa		11.07	□□□□□ -0.64
PHGDH-231	ENST00000641939	ZNF846	Q147U1	533 aa		11.07	□□□□□ -0.64
PHGDH-231	ENST00000641939	IL17D	Q8TAD2	202 aa		11.07	□□□□□ -0.64
PHGDH-231	ENST00000641939	RNF183	Q96D59	192 aa		11.07	□□□□□ -0.64
PHGDH-231	ENST00000641939	RAB40C	Q96S21	281 aa		11.07	□□□□□ -0.64
PHGDH-231	ENST00000641939	CCS	O14618	274 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	UPK1B	O75841	260 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	CFD	P00746	253 aa	Predicted RBP	11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	PAX9	P55771	341 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	TAS2R30	P59541	319 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	AKR1C1	Q04828	323 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	TMEM14EP	Q6UXP3	125 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	ACOT7L	Q6ZUV0	252 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	STH	Q8IWL8	128 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	NRN1	Q9NPD7	142 aa		11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	RCL1	Q9Y2P8	373 aa	Known RBP	11.06	□□□□□ -0.64
PHGDH-231	ENST00000641939	SMCO3	A2RU48	225 aa		11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	PMS2P5	A8MQ11	134 aa		11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	FAM25E	A8MYX2	175 aa		11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	TSC22D2	O75157	780 aa		11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	MBP	P02686	304 aa	Predicted RBP	11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	TMEM144	Q7Z5S9	345 aa		11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	BATF3	Q9NR55	127 aa		11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	RYR3	Q15413	4870 aa		11.05	□□□□□ -0.64
PHGDH-231	ENST00000641939	C5orf51	A6NDU8	294 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	METTL15P1	P0C7V9	234 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	SNRPD3	P62318	126 aa	Known RBP	11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	PSMG4	Q5JS54	123 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	C1orf194	Q5T5A4	169 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	BPIFC	Q8NFQ6	507 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	ENKUR	Q8TC29	256 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	PPP1R14B	Q96C90	147 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	SEPSECS	Q9HD40	501 aa	Known RBP	11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	FBXL17	Q9UF56	701 aa		11.04	□□□□□ -0.64
PHGDH-231	ENST00000641939	C7orf66	A4D0T2	115 aa		11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939	CCNK	O75909	580 aa		11.03	□□□□□ -0.64

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