RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
PHGDH-223ENST00000641597 KIR2DL5BA0A0G2JN68 375 aa13.45□□□□□ -0.26
PHGDH-223ENST00000641597 KIR2DL5BA0A0G2JPC4 375 aa13.45□□□□□ -0.26
PHGDH-223ENST00000641597 TAS2R60P59551 318 aa13.45□□□□□ -0.26
PHGDH-223ENST00000641597 SPACA3Q8IXA5 215 aa13.45□□□□□ -0.26
PHGDH-223ENST00000641597 KIR2DL5AQ8N109 375 aa13.45□□□□□ -0.26
PHGDH-223ENST00000641597 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
PHGDH-223ENST00000641597 A0A1W2PS18 150 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 PGPA6NDG6 321 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 AMTP48728 403 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 CAMPP49913 170 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 CDSNQ15517 529 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 LINC00311Q8N616 119 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 ZNF596Q8TC21 504 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 S4R3C0 116 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 NCOR2Q9Y618 2525 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 SIAH2O43255 324 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 GPX1P07203 203 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 ATP5IP56385 69 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-223ENST00000641597 Q0VG73 95 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 FBLN7Q53RD9 439 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 ZNF705AQ6ZN79 300 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-223ENST00000641597 THAP8Q8NA92 274 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 NUP35Q8NFH5 326 aa13.44□□□□□ -0.26
PHGDH-223ENST00000641597 TRAV8-1A0A0A6YYK1 113 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 FAM90A27PA6NNH2 459 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 SLC25A5P05141 298 aaKnown RBP13.43□□□□□ -0.26
PHGDH-223ENST00000641597 SUB1P53999 127 aaKnown RBP eCLIP13.43□□□□□ -0.26
PHGDH-223ENST00000641597 TBR1Q16650 682 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 INS-IGF2F8WCM5 200 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 AMY1AP04745 511 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 ESDP10768 282 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 NTF3P20783 257 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 ZNF137PP52743 207 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 BPIFB3P59826 476 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 Q8N976 141 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 BEND2Q8NDZ0 799 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 ZNF835Q9Y2P0 537 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 SIGLEC9Q9Y336 463 aa13.43□□□□□ -0.26
PHGDH-223ENST00000641597 IGHV1-3A0A0C4DH29 117 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 A0A1W2PRD5 423 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 A0A1W2PRF3 423 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 A0A1W2PRM7 423 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 A6NNC1 897 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 RPL27AP46776 148 aaKnown RBP13.42□□□□□ -0.26
PHGDH-223ENST00000641597 TCF24Q7RTU0 167 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 SIGLECL1Q8N7X8 197 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 TMEM68Q96MH6 324 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 NRN1Q9NPD7 142 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 INSIG2Q9Y5U4 225 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 IGLV1-47P01700 117 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 MYCNOSP40205 109 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 PAFAH1B2P68402 229 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 ATOH7Q8N100 152 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 OR1L4Q8NGR5 311 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 MBD6Q96DN6 1003 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 NEU1Q99519 415 aa13.42□□□□□ -0.26
PHGDH-223ENST00000641597 HIGD1CA8MV81 97 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 APCSP02743 223 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 BRS3P32247 399 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 C7orf69Q9H7B7 122 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 KAAG1Q9UBP8 84 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 IZUMO1RA6ND01 250 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 CRYGCP07315 174 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 TEX43Q6ZNM6 134 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 WNT10AQ9GZT5 417 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 EPDR1Q9UM22 224 aa13.41□□□□□ -0.26
PHGDH-223ENST00000641597 BUB1B-PAK6H3BSN5 160 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 M0QZ24 198 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 MC5RP33032 325 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 MAJINQ3KP22 176 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 VPS13CQ709C8 3753 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 TEX22C9J3V5 150 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 CRYGBP07316 175 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 G0S2P27469 103 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 APOBEC3AP31941 199 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-223ENST00000641597 LYZP61626 148 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 KLF17Q5JT82 389 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-223ENST00000641597 WDR73Q6P4I2 378 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 ASCL5Q7RTU5 278 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 PPP1R27Q86WC6 154 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 EXOC3-AS1Q8N2X6 119 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 SCNM1Q9BWG6 230 aa13.4□□□□□ -0.26
PHGDH-223ENST00000641597 PSG1P11464 419 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 LGALS7P47929 136 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 NIT1Q86X76 327 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 C18orf32Q8TCD1 76 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 KCNS1Q96KK3 526 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 ZNF331Q9NQX6 463 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-223ENST00000641597 SPTAN1Q13813 2472 aaKnown RBP13.39□□□□□ -0.27
PHGDH-223ENST00000641597 GP9P14770 177 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 UBE2G1P62253 170 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 FAM71F2Q6NXP2 309 aa13.39□□□□□ -0.27
PHGDH-223ENST00000641597 BCL6BQ8N143 479 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-223ENST00000641597 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms