RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 OR2C1O95371 312 aa12.99□□□□□ -0.33
PHGDH-216ENST00000641375 PCP4P48539 62 aa12.99□□□□□ -0.33
PHGDH-216ENST00000641375 SPATA31B1PQ5VZV4 182 aa12.99□□□□□ -0.33
PHGDH-216ENST00000641375 PUS1Q9Y606 427 aaKnown RBP eCLIP12.99□□□□□ -0.33
PHGDH-216ENST00000641375 PSMB11A5LHX3 300 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 A8MWP6 167 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 J3QLI3 93 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 GCHFRP30047 84 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-216ENST00000641375 ASPHD1Q5U4P2 390 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 FAM90A2PQ658T7 463 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 PQLC2Q6ZP29 291 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 MIR17HGQ75NE6 70 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 TMEM37Q8WXS4 190 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 PRO1933Q9H354 126 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 THYN1Q9P016 225 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 POLQO75417 2590 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 IGHV3-21A0A0B4J1V1 117 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 H3BQ15 152 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 COX7A2P2O60397 106 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 C21orf62-AS1Q17RA5 79 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 OR4F5Q8NH21 305 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 MBD6Q96DN6 1003 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 OR4F4Q96R69 305 aa12.98□□□□□ -0.33
PHGDH-216ENST00000641375 C11orf94C9JXX5 98 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 K7EIM0 57 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 Q5PR19 223 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 C10orf113Q5VZT2 155 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 SGMS2Q8NHU3 365 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 TMEM167BQ9NRX6 74 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 MOB4Q9Y3A3 225 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 IGLV11-55A0A075B6I3 123 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 PDE6DO43924 150 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 C8orf88P0DMB2 117 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 PRSS57Q6UWY2 283 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 C5orf56Q8N8D9 126 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 TVP23CQ96ET8 276 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 PSMG3-AS1Q96PY0 264 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 C20orf24Q9BUV8 137 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 ABCA12Q86UK0 2595 aa12.97□□□□□ -0.33
PHGDH-216ENST00000641375 DOPEY2Q9Y3R5 2298 aa12.96□□□□□ -0.33
PHGDH-216ENST00000641375 RNF223E7ERA6 249 aa12.96□□□□□ -0.33
PHGDH-216ENST00000641375 EGR2P11161 476 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-216ENST00000641375 CST9LP1Q5W188 147 aa12.96□□□□□ -0.33
PHGDH-216ENST00000641375 PIFOQ8TCI5 191 aa12.96□□□□□ -0.33
PHGDH-216ENST00000641375 HSPB9Q9BQS6 159 aa12.96□□□□□ -0.33
PHGDH-216ENST00000641375 ARL2-SNX15V9GYD0 113 aa12.96□□□□□ -0.33
PHGDH-216ENST00000641375 NAV2Q8IVL1 2488 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BKO60814 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 TGFAP01135 160 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BJP06899 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 IGLC1P0CG04 106 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BOP23527 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BBP33778 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BDP58876 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 UBE2G2P60604 165 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BCP62807 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 PNRC1Q12796 327 aaPredicted RBP12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 KLF17Q5JT82 389 aaPredicted RBP12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 FANCD2OSQ96PS1 177 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.34
PHGDH-216ENST00000641375 CELSR1Q9NYQ6 3014 aa12.95□□□□□ -0.34
PHGDH-216ENST00000641375 OR7C2O60412 319 aa12.95□□□□□ -0.34
PHGDH-216ENST00000641375 AVPP01185 164 aa12.95□□□□□ -0.34
PHGDH-216ENST00000641375 ABCA1O95477 2261 aa12.95□□□□□ -0.34
PHGDH-216ENST00000641375 A0A087WWC5 75 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 ZNF727A8MUV8 499 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 F6UZH7 168 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 PLP1P60201 277 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 ZNF674Q2M3X9 581 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 APCP25054 2843 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 TRAV30A0A087WSZ9 112 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 PATE2Q6UY27 113 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 TMEM219Q86XT9 240 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 OR5T1Q8NG75 326 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 FAM110DQ8TAY7 271 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-216ENST00000641375 ZNF48Q96MX3 618 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-216ENST00000641375 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
PHGDH-216ENST00000641375 ATP6V0E1O15342 81 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 ORM2P19652 201 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 CYB5R2Q6BCY4 276 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 UNQ5815/PRO19632Q6UWF5 114 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 LINC00305Q7Z4B0 112 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 OR1B1Q8NGR6 318 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 PITPNC1Q9UKF7 332 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 B4DEV8 164 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 TGOLN2O43493 480 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 HYPMO75409 117 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 ATP5G3P48201 142 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 MFAP4P55083 255 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 JOSD1Q15040 202 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-216ENST00000641375 MAPK1IP1LQ8NDC0 245 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
PHGDH-216ENST00000641375 PARLQ9H300 379 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms