RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TGFAP01135 160 aa13.59□□□□□ -0.23
PHGDH-208ENST00000641023 AVPP01185 164 aa13.59□□□□□ -0.23
PHGDH-208ENST00000641023 MT-ND4LP03901 98 aa13.59□□□□□ -0.23
PHGDH-208ENST00000641023 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
PHGDH-208ENST00000641023 ECSCRQ19T08 205 aa13.59□□□□□ -0.23
PHGDH-208ENST00000641023 C21orf62Q9NYP8 219 aa13.59□□□□□ -0.23
PHGDH-208ENST00000641023 HIGD1AQ9Y241 93 aa13.59□□□□□ -0.23
PHGDH-208ENST00000641023 SCO2A0A1W2PP80 73 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 RNF223E7ERA6 249 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 OR2J3O76001 311 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 LYZP61626 148 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 Q5PR19 223 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 FAM24BQ8N5W8 94 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 CTDSP1Q9GZU7 261 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 POLQO75417 2590 aa13.58□□□□□ -0.24
PHGDH-208ENST00000641023 SCGB2A1O75556 95 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 Q56UQ5 140 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 C11orf52Q96A22 123 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 DERL1Q9BUN8 251 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.249e-8■□□□□ 11
PHGDH-208ENST00000641023 CLDN34H7C241 214 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 NDUFB8O95169 186 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 TOMM40O96008 361 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 PYYP10082 97 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 YPEL3P61236 119 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-208ENST00000641023 RNF212Q495C1 297 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 HIST1H2BAQ96A08 127 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 FBXL7Q9UJT9 491 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 PITPNC1Q9UKF7 332 aa13.57□□□□□ -0.24
PHGDH-208ENST00000641023 H3BUX3 64 aa13.56□□□□□ -0.24
PHGDH-208ENST00000641023 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
PHGDH-208ENST00000641023 MAPK1IP1LQ8NDC0 245 aa13.56□□□□□ -0.24
PHGDH-208ENST00000641023 S4R3C0 116 aa13.56□□□□□ -0.24
PHGDH-208ENST00000641023 SH2D7A6NKC9 451 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-208ENST00000641023 KLK9Q2XQG4 91 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 VN1R17PQ8TDU5 208 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 FXYD5Q96DB9 178 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 TXN2Q99757 166 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 MRPL27Q9P0M9 148 aaKnown RBP13.55□□□□□ -0.24
PHGDH-208ENST00000641023 KLK9Q9UKQ9 250 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 SOX21Q9Y651 276 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-208ENST00000641023 NAV2Q8IVL1 2488 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 M0QZK8 103 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 AMY1AP04745 511 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 FCGR2BP31994 310 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-208ENST00000641023 PRSS57Q6UWY2 283 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 S100A7AQ86SG5 101 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 Q8WTZ3 238 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 MBD6Q96DN6 1003 aa13.55□□□□□ -0.24
PHGDH-208ENST00000641023 SLC25A39Q9BZJ4 359 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-208ENST00000641023 LINC01548A6NM66 108 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 GGTLC3B5MD39 225 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 CRYBA1P05813 215 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 LY6EQ16553 131 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 ZNF491Q8N8L2 437 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 RNF125Q96EQ8 232 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 MLXQ9UH92 298 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 ZFHX3Q15911 3703 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 A6NDX4 124 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 F8W735 103 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-208ENST00000641023 G3V318 75 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 IL4P05112 153 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 CRYBB3P26998 211 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 ANAPC16Q96DE5 110 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 URGCP-MRPS24S4R325 110 aa13.54□□□□□ -0.24
PHGDH-208ENST00000641023 ABCA12Q86UK0 2595 aa13.53□□□□□ -0.24
PHGDH-208ENST00000641023 TRBV9A0A0B4J1U6 114 aa13.53□□□□□ -0.24
PHGDH-208ENST00000641023 RPL35P42766 123 aaKnown RBP13.53□□□□□ -0.24
PHGDH-208ENST00000641023 ELOBQ15370 118 aa13.53□□□□□ -0.24
PHGDH-208ENST00000641023 C15orf32Q32M92 178 aa13.53□□□□□ -0.24
PHGDH-208ENST00000641023 PSMG3-AS1Q96PY0 264 aa13.53□□□□□ -0.24
PHGDH-208ENST00000641023 CELSR1Q9NYQ6 3014 aa13.53□□□□□ -0.24
PHGDH-208ENST00000641023 HELTA6NFD8 242 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 C9JCJ5 164 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 NBEAP1P0C6P0 100 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 IGHV4-31P0DP07 118 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 FOLR2P14207 255 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 RAB5AP20339 215 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 RHOGP84095 191 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 C9orf152Q5JTZ5 239 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 NECAP1Q8NC96 275 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 Q96MF0 132 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 YPEL4Q96NS1 127 aa13.52□□□□□ -0.24
PHGDH-208ENST00000641023 TRBV20OR9-2A0A075B6H5 130 aa13.52□□□□□ -0.25
PHGDH-208ENST00000641023 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
PHGDH-208ENST00000641023 WI2-2373I1.2A0A1W2PRP0 233 aa13.52□□□□□ -0.25
PHGDH-208ENST00000641023 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
PHGDH-208ENST00000641023 LEMD1Q68G75 181 aa13.52□□□□□ -0.25
PHGDH-208ENST00000641023 OR2T8A6NH00 312 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 H7BYZ3 331 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 CTSGP08311 255 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 GP9P14770 177 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 CRIP2P52943 208 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-208ENST00000641023 ZNF343Q6P1L6 599 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 TCEAL7Q9BRU2 100 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 ELOVL1Q9BW60 279 aa13.51□□□□□ -0.25
PHGDH-208ENST00000641023 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
PHGDH-208ENST00000641023 TMEM14CQ9P0S9 112 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms