RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 AP2S1P53680 142 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-211ENST00000641009 RBMY1FQ15415 496 aaKnown RBP10.1□□□□□ -0.79
LINC00339-211ENST00000641009 TMED4Q7Z7H5 227 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 RAB40CQ96S21 281 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 FAM90A26D6RGX4 464 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-211ENST00000641009 TMEM41BQ5BJD5 291 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 SIGLEC15Q6ZMC9 328 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 OR1S1Q8NH92 325 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 TRIM63Q969Q1 353 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 NRN1Q9NPD7 142 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 ZNF705EA8MWA4 302 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-211ENST00000641009 MIFP14174 115 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 FAUP35544 74 aaKnown RBP10.09□□□□□ -0.79
LINC00339-211ENST00000641009 SRPXP78539 464 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 GAMTQ14353 236 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 PYDC2Q56P42 97 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 CSNK1G2-AS1Q8NCQ2 148 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 C2CD4CQ8TF44 421 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 RNF125Q96EQ8 232 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 PBDC1Q9BVG4 233 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 X6R8D5 127 aa10.09□□□□□ -0.79
LINC00339-211ENST00000641009 IGKV1D-37A0A075B6S9 117 aa10.08□□□□□ -0.8
LINC00339-211ENST00000641009 ZFP92A6NM28 416 aa10.08□□□□□ -0.8
LINC00339-211ENST00000641009 SNRPD3P62318 126 aaKnown RBP10.08□□□□□ -0.8
LINC00339-211ENST00000641009 ZNF90Q03938 601 aa10.08□□□□□ -0.8
LINC00339-211ENST00000641009 TOMM5Q8N4H5 51 aa10.08□□□□□ -0.8
LINC00339-211ENST00000641009 ELOA3CA0A087WX78 387 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-211ENST00000641009 IAPPP10997 89 aa10.07□□□□□ -0.8
LINC00339-211ENST00000641009 GPX4P36969 197 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-211ENST00000641009 ZNF79Q15937 498 aa10.07□□□□□ -0.8
LINC00339-211ENST00000641009 TMEM128Q5BJH2 165 aa10.07□□□□□ -0.8
LINC00339-211ENST00000641009 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
LINC00339-211ENST00000641009 HRH4Q9H3N8 390 aa10.07□□□□□ -0.8
LINC00339-211ENST00000641009 TBC1D24Q9ULP9 559 aa10.07□□□□□ -0.8
LINC00339-211ENST00000641009 V9GYH0 126 aa10.07□□□□□ -0.8
LINC00339-211ENST00000641009 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 IGLL5B9A064 214 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 H3BMM0 161 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 PITX3O75364 302 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 VAMP1P23763 118 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 HLA-DMBP28068 263 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 AP3S2P59780 193 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 DEFB1P60022 68 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 PRR20EP86478 221 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 PRR20CP86479 221 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 PRR20DP86480 221 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 PRR20BP86481 221 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 PRR20AP86496 221 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 GSG1LQ6UXU4 331 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
LINC00339-211ENST00000641009 C11orf94C9JXX5 98 aa10.05□□□□□ -0.8
LINC00339-211ENST00000641009 ATP5IP56385 69 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-211ENST00000641009 LYZP61626 148 aa10.05□□□□□ -0.8
LINC00339-211ENST00000641009 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
LINC00339-211ENST00000641009 Q6ZTC4 211 aa10.05□□□□□ -0.8
LINC00339-211ENST00000641009 WDR12Q9GZL7 423 aaKnown RBP10.05□□□□□ -0.8
LINC00339-211ENST00000641009 SEPSECSQ9HD40 501 aaKnown RBP10.05□□□□□ -0.8
LINC00339-211ENST00000641009 PAIP2BQ9ULR5 123 aaKnown RBP10.05□□□□□ -0.8
LINC00339-211ENST00000641009 CELA1Q9UNI1 258 aa10.05□□□□□ -0.8
LINC00339-211ENST00000641009 CCDC160A6NGH7 325 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 HLA-DRB4P13762 266 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 NUP62P37198 522 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-211ENST00000641009 PPP1R1AQ13522 171 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 OR2F1Q13607 317 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 OR8G2PQ6IF36 304 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 LRTM2Q8N967 370 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 APLNQ9ULZ1 77 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 HLA-DRB4X5D2U9 266 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 IGKV1OR2-108A0A075B7D4 117 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 PIGBOS1A0A0B4J2F0 54 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 SFT2D2O95562 160 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 IGKV3-20P01619 116 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 NKX2-1P43699 371 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-211ENST00000641009 TCTAP57738 103 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 NUTF2P61970 127 aaKnown RBP10.04□□□□□ -0.8
LINC00339-211ENST00000641009 RAB11AP62491 216 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 ZNF767PQ75MW2 155 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 LINC00052Q96N35 136 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 SLC25A21Q9BQT8 299 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-211ENST00000641009 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 MAGT1Q9H0U3 335 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 PFDN2Q9UHV9 154 aa10.04□□□□□ -0.8
LINC00339-211ENST00000641009 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 SNRPGP15A8MWD9 76 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 FABP1P07148 127 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 HOXB5P09067 269 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 SLC25A6P12236 298 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 S100A5P33763 92 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 FXYD7P58549 80 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 TRGV9Q99603 122 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 NDUFA13Q9P0J0 144 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 TMED3Q9Y3Q3 217 aa10.03□□□□□ -0.8
LINC00339-211ENST00000641009 WRBO00258 174 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 SOCS3O14543 225 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 SYNGR2O43760 224 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms