RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	B2M	P61769	119 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	SPSB3	Q6PJ21	355 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	ZNF680	Q8NEM1	530 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	SLC39A9	Q9NUM3	307 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	GAR1	Q9NY12	217 aa	Known RBP	13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	TRRAP	Q9Y4A5	3859 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421		A0A1W2PRX2	142 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	TOMM40	O96008	361 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	RD3L	P0DJH9	198 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	ZNF616	Q08AN1	781 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	FFAR4	Q5NUL3	377 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	KLHL30-AS1	Q8NEE0	82 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	C4orf3	Q8WVX3	66 aa		13.65	□□□□□ -0.22
SPIN3-238	ENST00000640421	IGHV4OR15-8	A0A075B7B6	117 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	IGHV3OR16-8	A0A075B7F1	116 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421		A0A087WW49	117 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	ADARB2-AS1	A8MUL3	147 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	OR2C1	O95371	312 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	SELENOT	P62341	195 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	PHYHIPL	Q96FC7	376 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	C19orf24	Q9BVV8	132 aa		13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
SPIN3-238	ENST00000640421	TSPAN15	O95858	294 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	FHIT	P49789	147 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	RAB2A	P61019	212 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	C8orf86	Q6ZUL3	223 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	LURAP1L	Q8IV03	231 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	RCC1L	Q96I51	464 aa	Known RBP	13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	DUX3	Q96PT4	197 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	DOK5	Q9P104	306 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	WNK1	Q9H4A3	2382 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	SERF2	P84101	59 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	OR51G1	Q8NGK1	321 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	ZFAND3	Q9H8U3	227 aa		13.63	□□□□□ -0.23
SPIN3-238	ENST00000640421	ANK2	Q01484	3957 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	EIF3G	O75821	320 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	IL4	P05112	153 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	USF2	Q15853	346 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	TOMM20L	Q6UXN7	152 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	PATE2	Q6UY27	113 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	ZNF600	Q6ZNG1	722 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	TMEM37	Q8WXS4	190 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	KCNIP2	Q9NS61	270 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	RPRM	Q9NS64	109 aa		13.62	□□□□□ -0.23
SPIN3-238	ENST00000640421	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	NUDT19	A8MXV4	375 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	GGCT	O75223	188 aa	Known RBP	13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	LYZ	P61626	148 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	FAM209B	Q5JX69	171 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	UNQ9165/PRO28630	Q6UXU0	137 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421		Q8WTZ3	238 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	RNF125	Q96EQ8	232 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	SCGB2A1	O75556	95 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	ORM2	P19652	201 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	EIF5AL1	Q6IS14	154 aa	Known RBP	13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	RPP25L	Q8N5L8	163 aa	Known RBP	13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	OR11H1	Q8NG94	326 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	PBDC1	Q9BVG4	233 aa		13.61	□□□□□ -0.23
SPIN3-238	ENST00000640421	HSPB1	P04792	205 aa	Known RBP	13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	FABP1	P07148	127 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	M6PR	P20645	277 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	SULT1A2	P50226	295 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	PLP1	P60201	277 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	REL	Q04864	619 aa	Predicted RBP	13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	TMEM41B	Q5BJD5	291 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	AKR1C8P	Q5T2L2	129 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	SSX7	Q7RTT5	188 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	OR1B1	Q8NGR6	318 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	PCNP	Q8WW12	178 aa	Known RBP	13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	RAX2	Q96IS3	184 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	UHRF2	Q96PU4	802 aa		13.6	□□□□□ -0.23
SPIN3-238	ENST00000640421	IFNA7	P01567	189 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	ZNF726P1	Q15940	193 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	MORN5	Q5VZ52	161 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	SPATA31B1P	Q5VZV4	182 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421		Q6ZRG5	221 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	SEPSECS	Q9HD40	501 aa	Known RBP	13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	HOXD3	P31249	432 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	NSUN5P1	Q3KNT7	163 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	OR10G4	Q8NGN3	311 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	OR10G9	Q8NGN4	311 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	OR10G7	Q8NGN6	311 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	CITED1	Q99966	193 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	UBQLN2	Q9UHD9	624 aa		13.59	□□□□□ -0.23
SPIN3-238	ENST00000640421	UMAD1	C9J7I0	102 aa		13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	NDUFA4	O00483	81 aa		13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	OR5G3	P0C626	314 aa		13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	SLURP1	P55000	103 aa		13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	RPEL1	Q2QD12	228 aa		13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	OR1N2	Q8NGR9	330 aa		13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	MRPL27	Q9P0M9	148 aa	Known RBP	13.58	□□□□□ -0.24
SPIN3-238	ENST00000640421	LINC01619	G3V211	115 aa		13.57	□□□□□ -0.24
SPIN3-238	ENST00000640421	ZNF207	O43670	478 aa	Known RBP	13.57	□□□□□ -0.24
SPIN3-238	ENST00000640421	COX7A2P2	O60397	106 aa		13.57	□□□□□ -0.24
SPIN3-238	ENST00000640421	FAM122C	Q6P4D5	195 aa		13.57	□□□□□ -0.24
SPIN3-238	ENST00000640421	FAM213B	Q8TBF2	198 aa		13.57	□□□□□ -0.24
SPIN3-238	ENST00000640421	TMEM190	Q8WZ59	177 aa		13.57	□□□□□ -0.24
SPIN3-238	ENST00000640421	SLC25A22	Q9H936	323 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms