RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 FAM209BQ5JX69 171 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 FAM168AQ92567 244 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 OR51M1Q9H341 326 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 IL36BQ9NZH7 164 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 KMT2BQ9UMN6 2715 aaPredicted RBP12□□□□□ -0.49
TRIM3-215ENST00000639856 FCN1O00602 326 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 FABP4P15090 132 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 CD24P25063 80 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 PLGLAQ15195 96 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 SSX2Q16385 188 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 LINC00305Q7Z4B0 112 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 GSN-AS1Q9NRJ2 163 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 TRAV9-1A0A075B6T8 112 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 IGHV4-61A0A0C4DH41 118 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 FABP1P07148 127 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 CEACAM3P40198 252 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 DYNAPQ8N1N2 210 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 PERPQ96FX8 193 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
TRIM3-215ENST00000639856 ANKRD17O75179 2603 aaKnown RBP11.98□□□□□ -0.49
TRIM3-215ENST00000639856 SLC17A3O00476 420 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 ORM2P19652 201 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 OR5I1Q13606 314 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 TIGITQ495A1 244 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 C10orf105Q8TEF2 133 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 CFHR4Q92496 578 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 TBX15Q96SF7 602 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
TRIM3-215ENST00000639856 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 DMRT1Q9Y5R6 373 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 TOX4O94842 621 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 COX6B1P14854 86 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 LGALS4P56470 323 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 MMDQ15546 238 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 STXBP6Q8NFX7 210 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 OR1B1Q8NGR6 318 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 FXYD5Q96DB9 178 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 V9GYV3 84 aa11.98□□□□□ -0.49
TRIM3-215ENST00000639856 IGHV4-30-2A0A087WSY4 118 aa11.97□□□□□ -0.49
TRIM3-215ENST00000639856 IGHV3-21A0A0B4J1V1 117 aa11.97□□□□□ -0.49
TRIM3-215ENST00000639856 IGF2BP2-AS1Q96M15 143 aa11.97□□□□□ -0.49
TRIM3-215ENST00000639856 ABCA12Q86UK0 2595 aa11.97□□□□□ -0.49
TRIM3-215ENST00000639856 VWC2LB2RUY7 222 aa11.96□□□□□ -0.49
TRIM3-215ENST00000639856 NBR2O15453 112 aa11.96□□□□□ -0.49
TRIM3-215ENST00000639856 GCGP01275 180 aa11.96□□□□□ -0.49
TRIM3-215ENST00000639856 IGLV2-8P01709 118 aa11.96□□□□□ -0.49
TRIM3-215ENST00000639856 COL8A1P27658 744 aa11.96□□□□□ -0.49
TRIM3-215ENST00000639856 CNN1P51911 297 aaKnown RBP11.96□□□□□ -0.49
TRIM3-215ENST00000639856 PACRGQ96M98 296 aaPredicted RBP11.96□□□□□ -0.49
TRIM3-215ENST00000639856 CDC42EP3Q9UKI2 254 aa11.96□□□□□ -0.49
TRIM3-215ENST00000639856 CNIH1O95406 144 aa11.96□□□□□ -0.5
TRIM3-215ENST00000639856 TAS2R60P59551 318 aa11.96□□□□□ -0.5
TRIM3-215ENST00000639856 PLP1P60201 277 aa11.96□□□□□ -0.5
TRIM3-215ENST00000639856 YPEL3P61236 119 aaPredicted RBP11.96□□□□□ -0.5
TRIM3-215ENST00000639856 RPEL1Q2QD12 228 aa11.96□□□□□ -0.5
TRIM3-215ENST00000639856 CLEC2AQ6UVW9 174 aa11.96□□□□□ -0.5
TRIM3-215ENST00000639856 OSTCQ9NRP0 149 aa11.96□□□□□ -0.5
TRIM3-215ENST00000639856 TENM4Q6N022 2769 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 I3L2K1 104 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 ISLRO14498 428 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 HYPMO75409 117 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 NDUFA3O95167 84 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 ZNF329Q86UD4 541 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 NPBQ8NG41 125 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 WNT10AQ9GZT5 417 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 CSMD1Q96PZ7 3565 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 TRAV20A0A0B4J274 112 aa11.95□□□□□ -0.5
TRIM3-215ENST00000639856 RNASE7Q9H1E1 156 aaKnown RBP11.95□□□□□ -0.5
TRIM3-215ENST00000639856 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
TRIM3-215ENST00000639856 CELSR1Q9NYQ6 3014 aa11.94□□□□□ -0.5
TRIM3-215ENST00000639856 AMBPP02760 352 aa11.94□□□□□ -0.5
TRIM3-215ENST00000639856 IGLC1P0CG04 106 aa11.94□□□□□ -0.5
TRIM3-215ENST00000639856 MYCNOSP40205 109 aa11.94□□□□□ -0.5
TRIM3-215ENST00000639856 PEX7O00628 323 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 ABCA1O95477 2261 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 HES1Q14469 280 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 AJUBAQ96IF1 538 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 LINC00479Q96M42 142 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 NDUFS8O00217 210 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 MGST1P10620 155 aaKnown RBP11.93□□□□□ -0.5
TRIM3-215ENST00000639856 PSG1P11464 419 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 RANP62826 216 aaKnown RBP11.93□□□□□ -0.5
TRIM3-215ENST00000639856 IBA57Q5T440 356 aaKnown RBP11.93□□□□□ -0.5
TRIM3-215ENST00000639856 MINOS1Q5TGZ0 78 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 CDPF1Q6NVV7 123 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 MINOS1-NBL1R4GNA1 71 aa11.93□□□□□ -0.5
TRIM3-215ENST00000639856 SNRPCP09234 159 aaKnown RBP11.92□□□□□ -0.5
TRIM3-215ENST00000639856 NBEAP1P0C6P0 100 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 ADMP35318 185 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 UBE2E1P51965 193 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 FXYD3Q14802 87 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 CCDC144NLQ6NUI1 221 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 OR8I2Q8N0Y5 310 aa11.92□□□□□ -0.5
TRIM3-215ENST00000639856 POLR3KQ9Y2Y1 108 aaPredicted RBP11.92□□□□□ -0.5
TRIM3-215ENST00000639856 K7EIM0 57 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms