RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ZNF124Q15973 351 aa9.33□□□□□ -0.92
CLN6-225ENST00000638144 OR51G1Q8NGK1 321 aa9.33□□□□□ -0.92
CLN6-225ENST00000638144 Q8WTZ3 238 aa9.33□□□□□ -0.92
CLN6-225ENST00000638144 RCHY1Q96PM5 261 aa9.33□□□□□ -0.92
CLN6-225ENST00000638144 PBDC1Q9BVG4 233 aa9.33□□□□□ -0.92
CLN6-225ENST00000638144 OR4C46A6NHA9 309 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 INMT-MINDY4F8WBC2 141 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 SIX6O95475 246 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 IL5P05113 134 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 NHLRC4P0CG21 123 aaPredicted RBP9.32□□□□□ -0.92
CLN6-225ENST00000638144 DEFA1P59665 94 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 DEFA3P59666 94 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 S100A10P60903 97 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 LYZP61626 148 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 RPP30P78346 268 aaKnown RBP9.32□□□□□ -0.92
CLN6-225ENST00000638144 FAM90A2PQ658T7 463 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 GSG1LQ6UXU4 331 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 APRG1Q8IVJ8 170 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 FAM24BQ8N5W8 94 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 STXBP6Q8NFX7 210 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 SMIM8Q96KF7 97 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 FAM110AQ9BQ89 295 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 RABAC1Q9UI14 185 aa9.32□□□□□ -0.92
CLN6-225ENST00000638144 C7orf66A4D0T2 115 aa9.31□□□□□ -0.92
CLN6-225ENST00000638144 PMS2P5A8MQ11 134 aa9.31□□□□□ -0.92
CLN6-225ENST00000638144 K7EPK0 472 aa9.31□□□□□ -0.92
CLN6-225ENST00000638144 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLN6-225ENST00000638144 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
CLN6-225ENST00000638144 RNF125Q96EQ8 232 aa9.31□□□□□ -0.92
CLN6-225ENST00000638144 TM2D3Q9BRN9 247 aa9.31□□□□□ -0.92
CLN6-225ENST00000638144 MS4A6AQ9H2W1 248 aa9.31□□□□□ -0.92
CLN6-225ENST00000638144 L7N2F9 121 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 DNASE2O00115 360 aaPredicted RBP9.3□□□□□ -0.92
CLN6-225ENST00000638144 GOSR2O14653 212 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
CLN6-225ENST00000638144 BMI1P35226 326 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 VAMP2P63027 116 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 ARL16Q0P5N6 197 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 TMEM14EPQ6UXP3 125 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 LINC00322Q6ZN03 302 aaPredicted RBP9.3□□□□□ -0.92
CLN6-225ENST00000638144 TMEM182Q6ZP80 229 aaPredicted RBP9.3□□□□□ -0.92
CLN6-225ENST00000638144 THAP8Q8NA92 274 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 NARS2Q96I59 477 aaKnown RBP9.3□□□□□ -0.92
CLN6-225ENST00000638144 C2orf50Q96LR7 162 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 RAB40CQ96S21 281 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 TRGV9Q99603 122 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 TMEM231Q9H6L2 316 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 MAP6D1Q9H9H5 199 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
CLN6-225ENST00000638144 U3KQE9 123 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 AGRNO00468 2067 aa9.3□□□□□ -0.92
CLN6-225ENST00000638144 A0A1W2PS18 150 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 TSC22D2O75157 780 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 BCAP31P51572 246 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 RAB32Q13637 225 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 STPG3Q8N7X2 389 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 MARVELD1Q9BSK0 173 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 ZMAT4Q9H898 229 aa9.29□□□□□ -0.92
CLN6-225ENST00000638144 FAM24AA6NFZ4 105 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 CAV2P51636 162 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 LEMD1Q68G75 181 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 C16orf54Q6UWD8 224 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 GRAMD2BQ96HH9 432 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 SPATA25Q9BR10 227 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 GGTLC1Q9BX51 225 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 C11orf1Q9H5F2 150 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 DOK5Q9P104 306 aa9.28□□□□□ -0.92
CLN6-225ENST00000638144 DNAH7Q8WXX0 4024 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
CLN6-225ENST00000638144 SNRPGP15A8MWD9 76 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 PRAF2O60831 178 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 CST7O76096 145 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 FABP1P07148 127 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 ZNF688P0C7X2 276 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 EIF2B2P49770 351 aaKnown RBP9.27□□□□□ -0.93
CLN6-225ENST00000638144 TAS2R30P59541 319 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 DEFB131AP59861 70 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 PAFAH1B2P68402 229 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 DLK1P80370 383 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 SLC38A11Q08AI6 406 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 IL15RAQ13261 267 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 LRRC37A5PQ49AS3 106 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 TMEM144Q7Z5S9 345 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 TMEM217Q8N7C4 229 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 OR10P1Q8NGE3 313 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 PPP1R14BQ96C90 147 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 WWC2-AS2Q96NR7 200 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 MGAT4CQ9UBM8 478 aa9.27□□□□□ -0.93
CLN6-225ENST00000638144 IGSF23A1L1A6 192 aa9.26□□□□□ -0.93
CLN6-225ENST00000638144 K7EQG2 157 aa9.26□□□□□ -0.93
CLN6-225ENST00000638144 BUB3O43684 328 aa9.26□□□□□ -0.93
CLN6-225ENST00000638144 SSNA1O43805 119 aa9.26□□□□□ -0.93
CLN6-225ENST00000638144 ORM2P19652 201 aa9.26□□□□□ -0.93
CLN6-225ENST00000638144 SIGLEC15Q6ZMC9 328 aa9.26□□□□□ -0.93
CLN6-225ENST00000638144 OR1B1Q8NGR6 318 aa9.26□□□□□ -0.93
CLN6-225ENST00000638144 CD5P06127 495 aa9.25□□□□□ -0.93
CLN6-225ENST00000638144 H2BFSP57053 126 aa9.25□□□□□ -0.93
CLN6-225ENST00000638144 DEFB135Q30KP9 77 aa9.25□□□□□ -0.93
CLN6-225ENST00000638144 CYP2G1PQ6ZSU1 146 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms