RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CENPXA8MT69 81 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 WRBO00258 174 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 CA1P00915 261 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 DHRS2Q13268 280 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 PMS2P11Q13670 270 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 STHQ8IWL8 128 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 DCANP1Q8TF63 244 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 RNF125Q96EQ8 232 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 CIB3Q96Q77 187 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 PBDC1Q9BVG4 233 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 NDUFA13Q9P0J0 144 aa12.31□□□□□ -0.44
CACNA1A-259ENST00000638114 CXorf65A6NEN9 183 aa12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 SYNGR2O43760 224 aa12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 ADAP1O75689 374 aa12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 IL7P13232 177 aa12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 AP2S1P53680 142 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 RPP30P78346 268 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 EWSR1Q01844 656 aaKnown RBP eCLIP12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 GATAD1Q8WUU5 269 aa12.3□□□□□ -0.44
CACNA1A-259ENST00000638114 IGKV1D-37A0A075B6S9 117 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 BUB3O43684 328 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 JTBO76095 146 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 FABP1P07148 127 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 OR4E1P0C645 316 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 ZNF90Q03938 601 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 TMEM217Q8N7C4 229 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 COQ8AQ8NI60 647 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 RARRES2Q99969 163 aa12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 C7orf50Q9BRJ6 194 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-259ENST00000638114 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 H3BP45 60 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 ANXA7P20073 488 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 BTCP35070 178 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 NUP62P37198 522 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 LYZP61626 148 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 OR2F1Q13607 317 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 C4orf46Q504U0 113 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 SPANXN5Q5MJ07 72 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 SIGLEC15Q6ZMC9 328 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 AGRNO00468 2067 aa12.28□□□□□ -0.44
CACNA1A-259ENST00000638114 IFNA21P01568 189 aa12.27□□□□□ -0.45
CACNA1A-259ENST00000638114 ACTL10Q5JWF8 245 aa12.27□□□□□ -0.45
CACNA1A-259ENST00000638114 OR8G2PQ6IF36 304 aa12.27□□□□□ -0.45
CACNA1A-259ENST00000638114 TRPT1Q86TN4 253 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-259ENST00000638114 OR11H2Q8NH07 326 aa12.27□□□□□ -0.45
CACNA1A-259ENST00000638114 TRGV9Q99603 122 aa12.27□□□□□ -0.45
CACNA1A-259ENST00000638114 NRN1Q9NPD7 142 aa12.27□□□□□ -0.45
CACNA1A-259ENST00000638114 SNRPGP15A8MWD9 76 aa12.26□□□□□ -0.45
CACNA1A-259ENST00000638114 ATF4P18848 351 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-259ENST00000638114 SNRPD3P62318 126 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-259ENST00000638114 POLR2GP62487 172 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNA1A-259ENST00000638114 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
CACNA1A-259ENST00000638114 STRAPQ9Y3F4 350 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-259ENST00000638114 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
CACNA1A-259ENST00000638114 PRSS46E5RG02 174 aa12.25□□□□□ -0.45
CACNA1A-259ENST00000638114 SPP1P10451 314 aa12.25□□□□□ -0.45
CACNA1A-259ENST00000638114 NKX2-1P43699 371 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-259ENST00000638114 ID3Q02535 119 aa12.25□□□□□ -0.45
CACNA1A-259ENST00000638114 PPP1R14BQ96C90 147 aa12.25□□□□□ -0.45
CACNA1A-259ENST00000638114 NUPR2A6NF83 97 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 SSSCA1O60232 199 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 CNPY1Q3B7I2 92 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 MORN3Q6PF18 240 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 OR4D5Q8NGN0 318 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 RAB40CQ96S21 281 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 C20orf85Q9H1P6 137 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 PSENENQ9NZ42 101 aa12.24□□□□□ -0.45
CACNA1A-259ENST00000638114 PLA2G10O15496 165 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 LYRM1O43325 122 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 SCGB1D2O95969 90 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 C4BPBP20851 252 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 TMEM41BQ5BJD5 291 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 ACOT7LQ6ZUV0 252 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 C11orf68Q9H3H3 251 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 SEPSECSQ9HD40 501 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 FBXL17Q9UF56 701 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 PLECQ15149 4684 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 ALMS1Q8TCU4 4167 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 DNAH1Q9P2D7 4330 aa12.23□□□□□ -0.45
CACNA1A-259ENST00000638114 SMCO3A2RU48 225 aa12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 DEFB4AO15263 64 aa12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 CFDP00746 253 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 GIG44P09565 113 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 IAH1Q2TAA2 248 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 C1orf194Q5T5A4 169 aa12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 CEMP1Q6PRD7 247 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
CACNA1A-259ENST00000638114 OR8I2Q8N0Y5 310 aa12.21□□□□□ -0.45
CACNA1A-259ENST00000638114 BPIFCQ8NFQ6 507 aa12.21□□□□□ -0.45
CACNA1A-259ENST00000638114 GSKIPQ9P0R6 139 aa12.21□□□□□ -0.45
CACNA1A-259ENST00000638114 TCRBP04435 133 aa12.2□□□□□ -0.46
CACNA1A-259ENST00000638114 GATA2P23769 480 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-259ENST00000638114 ZBTB8BQ8NAP8 495 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-259ENST00000638114 C11orf45Q8TAV5 145 aa12.2□□□□□ -0.46
CACNA1A-259ENST00000638114 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-259ENST00000638114 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
CACNA1A-259ENST00000638114 LINC00052Q96N35 136 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms