RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 OR2T8A6NH00 312 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 NUPL2O15504 423 aaKnown RBP9.14□□□□□ -0.95
CLN6-223ENST00000637823 CLEC3BP05452 202 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 ELANEP08246 267 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 CDC34P49427 236 aaPredicted RBP9.14□□□□□ -0.95
CLN6-223ENST00000637823 FAM209BQ5JX69 171 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 SPSB3Q6PJ21 355 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 IL34Q6ZMJ4 242 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 ZNF329Q86UD4 541 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 Q8WTZ3 238 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 RAB24Q969Q5 203 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 MARC2Q969Z3 335 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 C16orf95Q9H693 158 aa9.14□□□□□ -0.95
CLN6-223ENST00000637823 NF1P21359 2839 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 WI2-2373I1.2A0A1W2PRP0 233 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 RAB19A4D1S5 217 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 MAP1LC3B2A6NCE7 125 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 COX7A2P2O60397 106 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 HYPMO75409 117 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 OR5G3P0C626 314 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 C10orf113Q5VZT2 155 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 LCN15Q6UWW0 184 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 CLEC19AQ6UXS0 136 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 PATE2Q6UY27 113 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 SSX7Q7RTT5 188 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 COMMD7Q86VX2 200 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 OR51G1Q8NGK1 321 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 CCDC140Q96MF4 163 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 MRPL32Q9BYC8 188 aaKnown RBP9.13□□□□□ -0.95
CLN6-223ENST00000637823 MAP1LC3BQ9GZQ8 125 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 SLC25A22Q9H936 323 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 FUT9Q9Y231 359 aa9.13□□□□□ -0.95
CLN6-223ENST00000637823 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.12□□□□□ -0.95
CLN6-223ENST00000637823 TGOLN2O43493 480 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 TCF21O43680 179 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 GPR183P32249 361 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 ADMP35318 185 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 KIAA0141Q14154 515 aaPredicted RBP9.12□□□□□ -0.95
CLN6-223ENST00000637823 FAM78BQ5VT40 261 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 ZNF343Q6P1L6 599 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 ZNF600Q6ZNG1 722 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 ZNF491Q8N8L2 437 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 TMEM37Q8WXS4 190 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 CHRDL1Q9BU40 450 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 SEPSECSQ9HD40 501 aaKnown RBP9.12□□□□□ -0.95
CLN6-223ENST00000637823 F8P00451 2351 aa9.12□□□□□ -0.95
CLN6-223ENST00000637823 NDUFA7O95182 113 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 OR2C1O95371 312 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 CXorf1O96002 111 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 STAG3L2P0CL84 134 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 STAG3L3P0CL85 134 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 ORM2P19652 201 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 LYZP61626 148 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 CCL20P78556 96 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 RELQ04864 619 aaPredicted RBP9.11□□□□□ -0.95
CLN6-223ENST00000637823 PMS2P11Q13670 270 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 C10orf99Q6UWK7 81 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 LCNL1Q6ZST4 164 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 S100A7AQ86SG5 101 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 EIF4E3Q8N5X7 224 aaKnown RBP9.11□□□□□ -0.95
CLN6-223ENST00000637823 KLHDC1Q8N7A1 406 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 OR4X2Q8NGF9 303 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 OR1B1Q8NGR6 318 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 MYOZ3Q8TDC0 251 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 TECRQ9NZ01 308 aaKnown RBP9.11□□□□□ -0.95
CLN6-223ENST00000637823 MRPL27Q9P0M9 148 aaKnown RBP9.11□□□□□ -0.95
CLN6-223ENST00000637823 DOK5Q9P104 306 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 HIGD1AQ9Y241 93 aa9.11□□□□□ -0.95
CLN6-223ENST00000637823 A0A1B0GV50 99 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
CLN6-223ENST00000637823 RPLP1P05386 114 aaKnown RBP9.1□□□□□ -0.95
CLN6-223ENST00000637823 C8orf88P0DMB2 117 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 ARL3P36405 182 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 PPT1P50897 306 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 FGF8P55075 233 aaPredicted RBP9.1□□□□□ -0.95
CLN6-223ENST00000637823 TAS2R45P59539 299 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 SPATA31B1PQ5VZV4 182 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 MIR17HGQ75NE6 70 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 LINC00305Q7Z4B0 112 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 OR5AU1Q8NGC0 362 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 RNF125Q96EQ8 232 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 UBE2E2Q96LR5 201 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 GNB4Q9HAV0 340 aa9.1□□□□□ -0.95
CLN6-223ENST00000637823 FN1P02751 2386 aaKnown RBP9.1□□□□□ -0.95
CLN6-223ENST00000637823 ANKRD34BA5PLL1 514 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 PPP5D1E7EU14 171 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 IGHV3-11P01762 117 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 IL4P05112 153 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 S100A7P31151 101 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 PSMB3P49720 205 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 KHDC3LQ587J8 217 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 UQCC3Q6UW78 93 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 TOMM20LQ6UXN7 152 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 PQLC2Q6ZP29 291 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 LINC01006Q8NI28 216 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 FAM210AQ96ND0 272 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 PBDC1Q9BVG4 233 aa9.09□□□□□ -0.95
CLN6-223ENST00000637823 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms