RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 RBM14Q96PK6 669 aaKnown RBP12.12□□□□□ -0.47
SCN8A-214ENST00000637709 C12orf57Q99622 126 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 ASCL2Q99929 193 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 TENM4Q6N022 2769 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 MDFIC2A0A1B0GVS7 189 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
SCN8A-214ENST00000637709 BPIFB3P59826 476 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 SLC35B1P78383 322 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 C22orf15Q8WYQ4 148 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 AP4M1O00189 453 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 ATP5J2P56134 94 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 ETFRF1Q6IPR1 90 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 CUBNO60494 3623 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 TEX15Q9BXT5 2789 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 NDUFA3O95167 84 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 CA1P00915 261 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-214ENST00000637709 S100PP25815 95 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 GNG4P50150 75 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 PRR31Q5SQ13 230 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 TEX38Q6PEX7 206 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-214ENST00000637709 MAPK1IP1LQ8NDC0 245 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 PFDN5Q99471 154 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
SCN8A-214ENST00000637709 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 IFITM10A6NMD0 228 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 UBE2CO00762 179 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 IGKV1-17P01599 117 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 MRPL41Q8IXM3 137 aaKnown RBP12.1□□□□□ -0.47
SCN8A-214ENST00000637709 NPBQ8NG41 125 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 OR1L4Q8NGR5 311 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 FAM168AQ92567 244 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 OR2J3O76001 311 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 TCL1AP56279 114 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 ERVFC1-1P60608 527 aa12.1□□□□□ -0.47
SCN8A-214ENST00000637709 CENPVL3A0A0U1RRI6 287 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 ZNF320A2RRD8 509 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 PPP5D1E7EU14 171 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 HYPMO75409 117 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 COL8A1P27658 744 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 ANAPC16Q96DE5 110 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 TRGV9Q99603 122 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 MRPL32Q9BYC8 188 aaKnown RBP12.09□□□□□ -0.47
SCN8A-214ENST00000637709 KLF2Q9Y5W3 355 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-214ENST00000637709 TRAV40A0A0B4J280 105 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 TMEM8BA6NDV4 472 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 SELENOTP62341 195 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 PVRIGQ6DKI7 326 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 C17orf77Q96MU5 243 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
SCN8A-214ENST00000637709 A0A1B0GUS0 222 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 PDLIM4P50479 330 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 CCDC144NLQ6NUI1 221 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 ZNF329Q86UD4 541 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 OR10G8Q8NGN5 311 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 C11orf52Q96A22 123 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 RNF5Q99942 180 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 C19orf24Q9BVV8 132 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 GPR61Q9BZJ8 451 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 OR2T8A6NH00 312 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 G3V318 75 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 ISLRO14498 428 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 PHOX2AO14813 284 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 RD3LP0DJH9 198 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 UBE2E1P51965 193 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 C1orf122Q6ZSJ8 110 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 Q8N9W7 124 aa12.08□□□□□ -0.48
SCN8A-214ENST00000637709 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 ZNF98A6NK75 572 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 CORTO00230 105 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 IL4P05112 153 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 EGR2P11161 476 aaPredicted RBP12.07□□□□□ -0.48
SCN8A-214ENST00000637709 ZNF562Q6V9R5 426 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 EXOC3-AS1Q8N2X6 119 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 Q8N6K4 173 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 SERTAD4Q9NUC0 356 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 NAV2Q8IVL1 2488 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 APCP25054 2843 aa12.07□□□□□ -0.48
SCN8A-214ENST00000637709 PGPA6NDG6 321 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 NPFFO15130 113 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 NDUFB8O95169 186 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 IGHV4-38-2P0DP08 117 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 IMMP2LQ96T52 175 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 TXNDC17Q9BRA2 123 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 A0A1W2PRE2 83 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 SLC25A5P05141 298 aaKnown RBP12.06□□□□□ -0.48
SCN8A-214ENST00000637709 Q56UQ5 140 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms