RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
CLN5-218ENST00000637397 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 ATP5L2Q7Z4Y8 100 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 USF3Q68DE3 2245 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 YLPM1P49750 1951 aaKnown RBP13.03□□□□□ -0.32
CLN5-218ENST00000637397 KIAA1671Q9BY89 1806 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 M0R381 172 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 RAB9AP51151 201 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 RNF125Q96EQ8 232 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 TMEM133Q9H2Q1 129 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 ST20Q9HBF5 79 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 FBXL7Q9UJT9 491 aa13.03□□□□□ -0.32
CLN5-218ENST00000637397 ZNF503-AS2A6NEH8 195 aa13.02□□□□□ -0.32
CLN5-218ENST00000637397 DLX6P56179 175 aa13.02□□□□□ -0.32
CLN5-218ENST00000637397 CACNG7P62955 275 aa13.02□□□□□ -0.32
CLN5-218ENST00000637397 TTC9CQ8N5M4 171 aa13.02□□□□□ -0.32
CLN5-218ENST00000637397 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.32
CLN5-218ENST00000637397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.33
CLN5-218ENST00000637397 TSPOP30536 169 aa13.02□□□□□ -0.33
CLN5-218ENST00000637397 EXOC3-AS1Q8N2X6 119 aa13.02□□□□□ -0.33
CLN5-218ENST00000637397 ZNF114Q8NC26 417 aa13.02□□□□□ -0.33
CLN5-218ENST00000637397 CACNA1BQ00975 2339 aa13.02□□□□□ -0.33
CLN5-218ENST00000637397 hDV102S1A0JD36 115 aa13.02□□□□□ -0.33
CLN5-218ENST00000637397 ID1P41134 155 aa13.02□□□□□ -0.33
CLN5-218ENST00000637397 TICRRQ7Z2Z1 1910 aa13.02□□□□□ -0.33
CLN5-218ENST00000637397 IGKV1-16P04430 117 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 DMRTC2Q8IXT2 367 aaPredicted RBP13.01□□□□□ -0.33
CLN5-218ENST00000637397 PLSCR4Q9NRQ2 329 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 LYNX1G3V0Z9 82 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 PRSS2P07478 247 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 LYNX1P0DP58 116 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 MPV17L2Q567V2 206 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 DPF1Q92782 380 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 TYMSP04818 313 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 C8orf46Q8TAG6 207 aa13.01□□□□□ -0.33
CLN5-218ENST00000637397 A0A1W2PS18 150 aa13□□□□□ -0.33
CLN5-218ENST00000637397 TRAV8-1A0A0A6YYK1 113 aa13□□□□□ -0.33
CLN5-218ENST00000637397 FAM57AQ8TBR7 257 aa13□□□□□ -0.33
CLN5-218ENST00000637397 HBDP02042 147 aa13□□□□□ -0.33
CLN5-218ENST00000637397 ZNF138P52744 262 aa13□□□□□ -0.33
CLN5-218ENST00000637397 MDS2Q8NDY4 140 aa13□□□□□ -0.33
CLN5-218ENST00000637397 PMS2P5A8MQ11 134 aa13□□□□□ -0.33
CLN5-218ENST00000637397 ATP5LO75964 103 aa13□□□□□ -0.33
CLN5-218ENST00000637397 FAM74A4Q5TZK3 123 aa13□□□□□ -0.33
CLN5-218ENST00000637397 WDR86Q86TI4 376 aa13□□□□□ -0.33
CLN5-218ENST00000637397 MCRIP2Q9BUT9 160 aaKnown RBP13□□□□□ -0.33
CLN5-218ENST00000637397 PSG1P11464 419 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 OR5AN1Q8NGI8 311 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 ARPC1AQ92747 370 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 C20orf144Q9BQM9 153 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 NCOA6Q14686 2063 aaPredicted RBP12.99□□□□□ -0.33
CLN5-218ENST00000637397 TCRAP04437 139 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 PPIFP30405 207 aaKnown RBP12.99□□□□□ -0.33
CLN5-218ENST00000637397 LEPP41159 167 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 RNFT1Q5M7Z0 435 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 SSC4DQ8WTU2 575 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 IGKV3-15P01624 115 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 Q0VG73 95 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 SCRT1Q9BWW7 348 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 RASL11AQ6T310 242 aa12.99□□□□□ -0.33
CLN5-218ENST00000637397 NAA38Q9BRA0 125 aaKnown RBP12.99□□□□□ -0.33
CLN5-218ENST00000637397 C5orf30Q96GV9 206 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 SLC25A15Q9Y619 301 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 NEUROG1Q92886 237 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 MRPL27Q9P0M9 148 aaKnown RBP12.98□□□□□ -0.33
CLN5-218ENST00000637397 FABP5P3A8MUU1 101 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 NBR2O15453 112 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 RNASE2P10153 161 aaKnown RBP12.98□□□□□ -0.33
CLN5-218ENST00000637397 Q6ZWC4 215 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 MEGF9Q9H1U4 602 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 NHP2Q9NX24 153 aaKnown RBP12.98□□□□□ -0.33
CLN5-218ENST00000637397 ALPK3Q96L96 1907 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 CD59P13987 128 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 TMEM200BQ69YZ2 307 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 EEF1AKMT3Q96AZ1 226 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 JKAMPQ9P055 326 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 ZNRD1Q9P1U0 126 aa12.98□□□□□ -0.33
CLN5-218ENST00000637397 LMO1P25800 156 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 PVRIGQ6DKI7 326 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 IGHV3OR16-10A0A075B7F0 116 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 TMEM167AQ8TBQ9 72 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 ORAOV1Q8WV07 137 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 IFI27L1Q96BM0 104 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 ABHD17AQ96GS6 310 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 MRPL16Q9NX20 251 aaKnown RBP12.97□□□□□ -0.33
CLN5-218ENST00000637397 A0A087X0K7 114 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 NDUFA3O95167 84 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 LY6EQ16553 131 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 SCGB3A1Q96QR1 104 aa12.97□□□□□ -0.33
CLN5-218ENST00000637397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLN5-218ENST00000637397 LY6G6EA0A0G2JKS1 128 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 PRSS8Q16651 343 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 SLC25A48Q6ZT89 311 aaKnown RBP12.96□□□□□ -0.33
CLN5-218ENST00000637397 OR2K2Q8NGT1 345 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 KIR2DL4Q99706 377 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 RAXQ9Y2V3 346 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms