RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 SETD2Q9BYW2 2564 aaPredicted RBP5.37□□□□□ -1.55
SCN2A-216ENST00000637367 SNCGO76070 127 aa5.37□□□□□ -1.55
SCN2A-216ENST00000637367 RPS20P60866 119 aaKnown RBP5.37□□□□□ -1.55
SCN2A-216ENST00000637367 PSG9Q00887 426 aa5.37□□□□□ -1.55
SCN2A-216ENST00000637367 ASPHD1Q5U4P2 390 aa5.37□□□□□ -1.55
SCN2A-216ENST00000637367 EBLN2Q6P2I7 272 aa5.37□□□□□ -1.55
SCN2A-216ENST00000637367 CIARTQ8N365 385 aaPredicted RBP5.37□□□□□ -1.55
SCN2A-216ENST00000637367 VKORC1Q9BQB6 163 aa5.37□□□□□ -1.55
SCN2A-216ENST00000637367 ZNRD1Q9P1U0 126 aa5.37□□□□□ -1.55
SCN2A-216ENST00000637367 LINC00527Q9UJ94 153 aa5.37□□□□□ -1.55
SCN2A-216ENST00000637367 TRAV30A0A087WSZ9 112 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 A0A087X0K7 114 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 NPIPB5A8MRT5 1133 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
SCN2A-216ENST00000637367 C15orf62A8K5M9 175 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 C17orf100A8MU93 164 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 COX6CP09669 75 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 ID1P41134 155 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 EMP1P54849 157 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 ATP5IP56385 69 aaPredicted RBP5.36□□□□□ -1.55
SCN2A-216ENST00000637367 PRCDQ00LT1 54 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 ADIPOQQ15848 244 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 ZNF585BQ52M93 769 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 CLEC19AQ6UXS0 136 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 FAM90A1Q86YD7 464 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 SCGB3A1Q96QR1 104 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 GNB1LQ9BYB4 327 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 IGHV1-18A0A0C4DH31 117 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 PMS2P5A8MQ11 134 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 TSPOP30536 169 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 LEPP41159 167 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 Q0VFX4 171 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 PPP1R27Q86WC6 154 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 WFDC12Q8WWY7 111 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 COQ2Q96H96 371 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 PSG8Q9UQ74 426 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 LINC00312Q9Y6C7 94 aa5.36□□□□□ -1.55
SCN2A-216ENST00000637367 TRAV9-1A0A075B6T8 112 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 TCRBV4S1A1TA0A5B7 111 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 TRGV3P03979 118 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 LYL1P12980 280 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 CDKN1AP38936 164 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 TMEM42Q69YG0 159 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 FAM159AQ6UWV7 190 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 CD177Q8N6Q3 437 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-216ENST00000637367 RNASEH2CQ8TDP1 164 aaKnown RBP5.35□□□□□ -1.55
SCN2A-216ENST00000637367 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 SCRT1Q9BWW7 348 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 GP6Q9HCN6 339 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 MLNRO43193 412 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 TMPRSS3P57727 454 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 C17orf82Q86X59 251 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-216ENST00000637367 RNF125Q96EQ8 232 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 FMC1Q96HJ9 113 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 A0A1B0GW64 132 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 GFRA3O60609 400 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 ZFP36L1Q07352 338 aaKnown RBP5.35□□□□□ -1.55
SCN2A-216ENST00000637367 ACTL10Q5JWF8 245 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 OR2K2Q8NGT1 345 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 TSKUQ8WUA8 353 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 SNHG12Q9BXW3 62 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 TSC2P49815 1807 aa5.35□□□□□ -1.55
SCN2A-216ENST00000637367 A0A1W2PS18 150 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 SRRM5B3KS81 715 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 TM4SF5O14894 197 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 PFN1P07737 140 aaKnown RBP5.34□□□□□ -1.55
SCN2A-216ENST00000637367 PAX9P55771 341 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 ATP5G2Q06055 141 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 SMAGPQ0VAQ4 97 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 DDB2Q92466 427 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 ABHD17AQ96GS6 310 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 A8MWP6 167 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 IGKV1-16P04430 117 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 Q8TAT8 98 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 VOPP1Q96AW1 172 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 RPUSD1Q9UJJ7 312 aaKnown RBP5.34□□□□□ -1.55
SCN2A-216ENST00000637367 IGKV3D-20A0A0C4DH25 116 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 NPIPB6E9PJ23 425 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 TIMM23O14925 209 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 IGHV1-46P01743 117 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 IGHV2-70P01814 119 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 PDLIM4P50479 330 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 SRSF6Q13247 344 aaKnown RBP5.34□□□□□ -1.55
SCN2A-216ENST00000637367 TTC32Q5I0X7 151 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 MEIG1Q5JSS6 88 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 Q6P435 159 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 ARPC1AQ92747 370 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 IFI27L1Q96BM0 104 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 C2orf88Q9BSF0 95 aa5.34□□□□□ -1.55
SCN2A-216ENST00000637367 POLR3KQ9Y2Y1 108 aaPredicted RBP5.34□□□□□ -1.55
SCN2A-216ENST00000637367 IGKV2-40A0A087WW87 121 aaPredicted RBP5.34□□□□□ -1.56
SCN2A-216ENST00000637367 FAM181BA6NEQ2 426 aa5.34□□□□□ -1.56
SCN2A-216ENST00000637367 B9A039 149 aa5.34□□□□□ -1.56
SCN2A-216ENST00000637367 IGKV2D-40P01614 121 aaPredicted RBP5.34□□□□□ -1.56
SCN2A-216ENST00000637367 HBDP02042 147 aa5.34□□□□□ -1.56
SCN2A-216ENST00000637367 PSG1P11464 419 aa5.34□□□□□ -1.56
SCN2A-216ENST00000637367 APOBEC3AP31941 199 aaPredicted RBP5.34□□□□□ -1.56
SCN2A-216ENST00000637367 ZNF726P1Q15940 193 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms