RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	SPSB3	Q6PJ21	355 aa		13.62	□□□□□ -0.23
CACNA1A-238	ENST00000637276	LAMB2	P55268	1798 aa		13.62	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GZMM	P51124	257 aa		13.62	□□□□□ -0.23
CACNA1A-238	ENST00000637276	TCTEX1D4	Q5JR98	221 aa		13.62	□□□□□ -0.23
CACNA1A-238	ENST00000637276	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.61	□□□□□ -0.23
CACNA1A-238	ENST00000637276	SS18	Q15532	418 aa		13.61	□□□□□ -0.23
CACNA1A-238	ENST00000637276	IGLV1-36	A0A0B4J1U3	117 aa		13.61	□□□□□ -0.23
CACNA1A-238	ENST00000637276	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.61	□□□□□ -0.23
CACNA1A-238	ENST00000637276	LIMS1	P48059	325 aa		13.61	□□□□□ -0.23
CACNA1A-238	ENST00000637276	IL36B	Q9NZH7	164 aa		13.61	□□□□□ -0.23
CACNA1A-238	ENST00000637276	ALS2	Q96Q42	1657 aa		13.61	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GAGE12B	A1L429	117 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	FABP5P3	A8MUU1	101 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GAGE7	O76087	117 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	DANCR	P0C864	163 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GAGE12F	P0CL80	117 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GAGE12G	P0CL81	117 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GAGE12I	P0CL82	117 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	ZNF837	Q96EG3	531 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	MRPS18A	Q9NVS2	196 aa	Known RBP	13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	ARAP2	Q8WZ64	1704 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276		Q96M66	194 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	C14orf178	Q8N769	122 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	TRAV12-2	A0A075B6T6	113 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	LEPROT	O15243	131 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	SLC25A16	P16260	332 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	SAP25	Q8TEE9	199 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	KLF12	Q9Y4X4	402 aa		13.6	□□□□□ -0.23
CACNA1A-238	ENST00000637276	TRGV11	A0A075B6L2	103 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	IGF2BP2-AS1	Q96M15	143 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	PCNX2	A6NKB5	2137 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	PIN1P1	O15428	100 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	ATP5L2	Q7Z4Y8	100 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	POC1A	Q8NBT0	407 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	PMVK	Q15126	192 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	C2orf68	Q2NKX9	166 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276		Q6ZQT7	251 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	IGKV1D-43	A0A0B4J1Z2	117 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276		A8MWV9	139 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	C1QTNF9	P0C862	333 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	SVIP	Q8NHG7	77 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	SMIM8	Q96KF7	97 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	CSTL1	Q9H114	145 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	PPP1R3E	Q9H7J1	279 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	IGKV2D-24	A0A075B6R9	120 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	TRBV5-5	A0A0J9YX44	114 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GAGE2B	Q13066	116 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	C10orf55	Q5SWW7	151 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	C12orf77	C9JDV5	145 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	SEC11A	P67812	179 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	C15orf32	Q32M92	178 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	CIART	Q8N365	385 aa	Predicted RBP	13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	ESM1	Q9NQ30	184 aa		13.59	□□□□□ -0.23
CACNA1A-238	ENST00000637276	GHRH	P01286	108 aa		13.58	□□□□□ -0.23
CACNA1A-238	ENST00000637276	SAMD5	Q5TGI4	173 aa		13.58	□□□□□ -0.23
CACNA1A-238	ENST00000637276	ZNF525	Q8N782	197 aa		13.58	□□□□□ -0.23
CACNA1A-238	ENST00000637276	ZMAT4	Q9H898	229 aa		13.58	□□□□□ -0.23
CACNA1A-238	ENST00000637276	TEX43	Q6ZNM6	134 aa		13.58	□□□□□ -0.24
CACNA1A-238	ENST00000637276	MRPL52	Q86TS9	123 aa	Known RBP	13.58	□□□□□ -0.24
CACNA1A-238	ENST00000637276	hDV102S1	A0JD36	115 aa		13.58	□□□□□ -0.24
CACNA1A-238	ENST00000637276	PTGDS	P41222	190 aa		13.58	□□□□□ -0.24
CACNA1A-238	ENST00000637276	CFHR5	Q9BXR6	569 aa		13.58	□□□□□ -0.24
CACNA1A-238	ENST00000637276	PMS2P5	A8MQ11	134 aa		13.58	□□□□□ -0.24
CACNA1A-238	ENST00000637276	FST	P19883	344 aa		13.58	□□□□□ -0.24
CACNA1A-238	ENST00000637276	ZNF138	P52744	262 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	RNF125	Q96EQ8	232 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	BMPER	Q8N8U9	685 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	GAS1	P54826	345 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	SRSF3	P84103	164 aa	Known RBP	13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	ASPHD1	Q5U4P2	390 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	SRSF8	Q9BRL6	282 aa	Known RBP	13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	SELL	P14151	372 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276		Q0VFX4	171 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	MAJIN	Q3KP22	176 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	MORN3	Q6PF18	240 aa	Predicted RBP	13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	SPACA3	Q8IXA5	215 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	SPOCK3	Q9BQ16	436 aa		13.57	□□□□□ -0.24
CACNA1A-238	ENST00000637276	DUSP14	O95147	198 aa	Known RBP	13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	FOXG1	P55316	489 aa	Predicted RBP	13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	WDYHV1	Q96HA8	205 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	IGHG3	P01860	377 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	PRIMA1	Q86XR5	153 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	RCC1L	Q96I51	464 aa	Known RBP	13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	SHANK3	Q9BYB0	1731 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	LOC102723996	A0A087X1L8	192 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	RPL36A	P83881	106 aa	Known RBP	13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	RPL36AL	Q969Q0	106 aa	Known RBP	13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	IGKV1-39	P01597	117 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	IGKV1D-39	P04432	117 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	CD5	P06127	495 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	ZNF708	P17019	499 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	TCF15	Q12870	199 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	ZFAND6	Q6FIF0	208 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	SCRT2	Q9NQ03	307 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	PILRA	Q9UKJ1	303 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	PLCE1	Q9P212	2302 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276		A0A087X0K7	114 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276	TRBV5-3	A0A0A0MS03	114 aa		13.56	□□□□□ -0.24
CACNA1A-238	ENST00000637276		D6R8Y8	96 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms