RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 AMN1Q8IY45 258 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 CIARTQ8N365 385 aaPredicted RBP4.73□□□□□ -1.65
SCN2A-212ENST00000636662 C15orf53Q8NAA6 179 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 CXXC4Q9H2H0 198 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 NRXN2Q9P2S2 1712 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 FAM90A2PQ658T7 463 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 ZNF525Q8N782 197 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 C8orf46Q8TAG6 207 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 FOXB1Q99853 325 aa4.73□□□□□ -1.65
SCN2A-212ENST00000636662 TRGV8A0A0C4DH27 118 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 C3orf79P0CE67 100 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 CCDC144NLQ6NUI1 221 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 XIRP1Q702N8 1843 aaKnown RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 LTBP3Q9NS15 1303 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 SHISA9B4DS77 424 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 SMAD7O15105 426 aaKnown RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 THAP10Q9P2Z0 257 aaPredicted RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 SCO2A0A1W2PP80 73 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 H0YIZ8 118 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 SNRPD3P62318 126 aaKnown RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 ZNF146Q15072 292 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 STPG4Q8N801 248 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 MED12LQ86YW9 2145 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 CXCL13O43927 109 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 CRIM1Q9NZV1 1036 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 MUC4Q99102 2169 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 IGHV3OR15-7A0A075B7D8 119 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 FAM240AA0A1B0GVK7 77 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 TM4SF19Q96DZ7 209 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 THSD7AQ9UPZ6 1657 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 IGHV1OR21-1A0A087WYE8 117 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 IGHV1-45A0A0A0MS14 117 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 A0A0A6YYD4 124 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 A0A1B0GX51 115 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 J3QW42 95 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 KLK10O43240 276 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 LINC01590Q5TEZ4 76 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 ZNF488Q96MN9 340 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 CADP27708 2225 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 TRGV2A0A075B6R0 118 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 PGLYRP1O75594 196 aaPredicted RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 PLA2G2AP14555 144 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 RPL27AP46776 148 aaKnown RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 C5orf64Q2M2E5 130 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 RNF166Q96A37 237 aaPredicted RBP4.72□□□□□ -1.65
SCN2A-212ENST00000636662 VSTM2LQ96N03 204 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 MLST8Q9BVC4 326 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 COL6A6A6NMZ7 2263 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 IGKV1D-42A0A075B6H8 117 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 TMEM74BQ9NUR3 256 aa4.72□□□□□ -1.65
SCN2A-212ENST00000636662 NCKAP5O14513 1909 aa4.71□□□□□ -1.65
SCN2A-212ENST00000636662 YPEL1O60688 119 aa4.71□□□□□ -1.65
SCN2A-212ENST00000636662 CD3EP07766 207 aa4.71□□□□□ -1.65
SCN2A-212ENST00000636662 PEBP1P30086 187 aaKnown RBP4.71□□□□□ -1.65
SCN2A-212ENST00000636662 YPEL2Q96QA6 119 aa4.71□□□□□ -1.65
SCN2A-212ENST00000636662 PILRBQ9UKJ0 227 aa4.71□□□□□ -1.65
SCN2A-212ENST00000636662 SCN10AQ9Y5Y9 1956 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 TAX1BP3O14907 124 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 PIGYQ3MUY2 71 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 Q6ZS49 121 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 C20orf173Q96LM9 149 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 OTORQ9NRC9 128 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 hCG_38984A0A1B0GV85 526 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 RNASE7Q9H1E1 156 aaKnown RBP4.71□□□□□ -1.66
SCN2A-212ENST00000636662 PKDREJQ9NTG1 2253 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 DSCR4P56555 118 aaPredicted RBP4.71□□□□□ -1.66
SCN2A-212ENST00000636662 RNF125Q96EQ8 232 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 OBSL1O75147 1896 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 IQCF6A8MYZ5 107 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 CXorf66Q5JRM2 361 aaPredicted RBP4.71□□□□□ -1.66
SCN2A-212ENST00000636662 CLLU1OSQ5K130 101 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 C8orf44Q96CB5 159 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 LINC01587Q99440 93 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 LRRK1Q38SD2 2015 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 H3BMG7 143 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 Q6ZNB5 142 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 C18orf32Q8TCD1 76 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 RNF183Q96D59 192 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 TMEM131Q92545 1883 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 TMEM202A6NGA9 273 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 ETDBQ3ZM63 59 aa4.71□□□□□ -1.66
SCN2A-212ENST00000636662 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
SCN2A-212ENST00000636662 IGHV3-72A0A0B4J1Y9 119 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 RPUSD1Q9UJJ7 312 aaKnown RBP4.7□□□□□ -1.66
SCN2A-212ENST00000636662 TRAV26-1A0A087WT03 109 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 COL9A1P20849 921 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 RUNX3Q13761 415 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 C17orf99Q6UX52 265 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 BHLHA9Q7RTU4 235 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 ITLN2Q8WWU7 325 aaPredicted RBP4.7□□□□□ -1.66
SCN2A-212ENST00000636662 IFI27L2Q9H2X8 130 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 POLEQ07864 2286 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 IGHV3-49A0A0A0MS15 119 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 IGHV3-35A0A0C4DH35 117 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 SHISA8B8ZZ34 492 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 SRD5A1P18405 259 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 C3orf36Q3SXR2 165 aa4.7□□□□□ -1.66
SCN2A-212ENST00000636662 RPL8P62917 257 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms