RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	IGKV1-5	P01602	117 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	PYY	P10082	97 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	CX3CL1	P78423	397 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	WFDC12	Q8WWY7	111 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	RNF114	Q9Y508	228 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	SLC17A3	O00476	420 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ISLR	O14498	428 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	IGKV1-16	P04430	117 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	CYTL1	Q9NRR1	136 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	DLEU1	O43261	78 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	MAS1L	P35410	378 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	JOSD1	Q15040	202 aa	Predicted RBP	11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ELOB	Q15370	118 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	TMEM249	Q2WGJ8	235 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	PSMG3	Q9BT73	122 aa	Predicted RBP	11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	PHLDA3	Q9Y5J5	127 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	TMEM144	Q7Z5S9	345 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	NACA	E9PAV3	2078 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	CD33	P20138	364 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	TDGF1P3	P51864	188 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	MLANA	Q16655	118 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ZNF664	Q8N3J9	261 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	KLK15	Q9H2R5	256 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	SMDT1	Q9H4I9	107 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997		A0A0G2JLM5	398 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	SCO2	A0A1W2PP80	73 aa		11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	FOXA3	P55318	350 aa	Predicted RBP	11.72	□□□□□ -0.53
NEDD4L-238	ENST00000635997	F8	P00451	2351 aa		11.71	□□□□□ -0.53
NEDD4L-238	ENST00000635997	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.71	□□□□□ -0.53
NEDD4L-238	ENST00000635997	TEX50	A0A1B0GTY4	177 aa		11.71	□□□□□ -0.53
NEDD4L-238	ENST00000635997	WNT2	P09544	360 aa		11.71	□□□□□ -0.53
NEDD4L-238	ENST00000635997	MPZ	P25189	248 aa		11.71	□□□□□ -0.53
NEDD4L-238	ENST00000635997	PCNX3	Q9H6A9	2034 aa		11.71	□□□□□ -0.54
NEDD4L-238	ENST00000635997	IGHV1-3	A0A0C4DH29	117 aa		11.71	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PGPEP1L	A6NFU8	196 aa		11.71	□□□□□ -0.54
NEDD4L-238	ENST00000635997	CKS2	P33552	79 aa		11.71	□□□□□ -0.54
NEDD4L-238	ENST00000635997	WDR86	Q86TI4	376 aa		11.71	□□□□□ -0.54
NEDD4L-238	ENST00000635997		A0A0G2JRQ6	117 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	GRIFIN	A4D1Z8	144 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997		Q6ZRM9	215 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	IGKV1-6	A0A0C4DH72	117 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.7	□□□□□ -0.54	6e-12	■■■■■ 196.8
NEDD4L-238	ENST00000635997	DAZAP2	Q15038	168 aa	Predicted RBP	11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	MAJIN	Q3KP22	176 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	C2orf83	Q53S99	150 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	VSIR	Q9H7M9	311 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	DIRC3	C9JPN6	131 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	IGHV2-5	P01817	119 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	CCL20	P78556	96 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RELB	Q01201	579 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RRN3P1	Q2M238	152 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SAPCD1	Q5SSQ6	148 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997		M0R381	172 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	BTF3	P20290	206 aa	Known RBP	11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	ANOS1	P23352	680 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	GNG5	P63218	68 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	CD69	Q07108	199 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	MST1L	Q2TV78	715 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	CACNG8	Q8WXS5	425 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	WFDC1	Q9HC57	220 aa		11.7	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SNRPD3	P62318	126 aa	Known RBP	11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	ERAS	Q7Z444	233 aa		11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	TEX45	Q8NA69	505 aa		11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	TXNDC17	Q9BRA2	123 aa		11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	TRAV5	A0A0B4J249	113 aa		11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SRP19	P09132	144 aa	Known RBP	11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	EMP1	P54849	157 aa		11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	AMBP	P02760	352 aa		11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	ATP5I	P56385	69 aa	Predicted RBP	11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PRCD	Q00LT1	54 aa		11.69	□□□□□ -0.54
NEDD4L-238	ENST00000635997	GTF2H5	Q6ZYL4	71 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	C1orf147	Q96MC9	270 aa	Predicted RBP	11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	CBLN1	P23435	193 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SAA4	P35542	130 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PRSS8	Q16651	343 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997		Q1RN00	199 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RUSC1-AS1	Q66K80	236 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	OR4D5	Q8NGN0	318 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RNF125	Q96EQ8	232 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	C19orf84	I3L1E1	186 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	C15orf32	Q32M92	178 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RAX2	Q96IS3	184 aa		11.68	□□□□□ -0.54
NEDD4L-238	ENST00000635997	NPS	P0C0P6	89 aa		11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997	C19orf24	Q9BVV8	132 aa		11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997	MRPL32	Q9BYC8	188 aa	Known RBP	11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997	IGKV3OR2-268	A0A0C4DH90	116 aa		11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997	LIME1	Q9H400	295 aa		11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SPATA45	Q537H7	98 aa		11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997	TPTE2P1	Q5T6R2	138 aa		11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997	FAM159A	Q6UWV7	190 aa		11.67	□□□□□ -0.54
NEDD4L-238	ENST00000635997		A8MWP6	167 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	AREG	P15514	252 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	C1QL4	Q86Z23	238 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	IGHV4-30-2	A0A087WSY4	118 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997		K7ERU9	68 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	MMP23A	O75900	390 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	HLA-DRB1	P01911	266 aa		11.66	□□□□□ -0.54

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