RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 DEDDO75618 318 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 CCNKO75909 580 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 CFDP00746 253 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 BCAP31P51572 246 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 CAV2P51636 162 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 H2BFSP57053 126 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 CD81P60033 236 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 ZNF90Q03938 601 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 USF2Q15853 346 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 ST8SIA2Q92186 375 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 RNF125Q96EQ8 232 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 NEURL2Q9BR09 285 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 MGAT4CQ9UBM8 478 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 ALG5Q9Y673 324 aa11.07□□□□□ -0.64
CDC42BPB-209ENST00000634889 APOHP02749 345 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 RLN2P04090 185 aa11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 HNRNPCP07910 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 IGHV4-30-4P0DP06 118 aa11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 NUP62P37198 522 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 FAM90A2PQ658T7 463 aa11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 GRAMD2BQ96HH9 432 aa11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 RABAC1Q9UI14 185 aa11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 U3KQE9 123 aa11.06□□□□□ -0.64
CDC42BPB-209ENST00000634889 IGHV3OR16-13A0A075B7E8 117 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 IGHV3-74A0A0B4J1X5 117 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 SMCO3A2RU48 225 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 OR4C46A6NHA9 309 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 CD7P09564 240 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 PET100P0DJ07 73 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 TCF24Q7RTU0 167 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 STX12Q86Y82 276 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 NPVFQ9HCQ7 196 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 PFDN2Q9UHV9 154 aa11.05□□□□□ -0.64
CDC42BPB-209ENST00000634889 FAM24AA6NFZ4 105 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 E5RGE8 158 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 P2RY1P47900 373 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 EIF2B2P49770 351 aaKnown RBP11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 SULT1A1P50225 295 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 RRAS2P62070 204 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 PAFAH1B2P68402 229 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 HBG1P69891 147 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 HBG2P69892 147 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 SLC38A11Q08AI6 406 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 ARL16Q0P5N6 197 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 OXA1LQ15070 435 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 TMEM252Q8N6L7 170 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 PPP1R1CQ8WVI7 109 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 FAM110AQ9BQ89 295 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
CDC42BPB-209ENST00000634889 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 DFFBO76075 338 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 CST7O76096 145 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 S100A11P31949 105 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 LYZP61626 148 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 SELENOTP62341 195 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 OR2F1Q13607 317 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 BPIFCQ8NFQ6 507 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 PBDC1Q9BVG4 233 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 SLC45A2Q9UMX9 530 aa11.03□□□□□ -0.64
CDC42BPB-209ENST00000634889 IGSF23A1L1A6 192 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 HELTA6NFD8 242 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 BUB3O43684 328 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 CMC4P56277 68 aaPredicted RBP11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 VWC2Q2TAL6 325 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 C16orf54Q6UWD8 224 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 CYP2G1PQ6ZSU1 146 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 GLMPQ8WWB7 406 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 SLC25A31Q9H0C2 315 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 MED28Q9H204 178 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 TUBA4BQ9H853 241 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 OR5AC2Q9NZP5 309 aa11.02□□□□□ -0.65
CDC42BPB-209ENST00000634889 TGP01266 2768 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 COL7A1Q02388 2944 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 H0YIZ8 118 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 MPC2O95563 127 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 NHLRC4P0CG21 123 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 S100A7P31151 101 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 AP2S1P53680 142 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 RPL11P62913 178 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 BAXQ07812 192 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 C1orf194Q5T5A4 169 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 ZNF546Q86UE3 836 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 TMEM217Q8N7C4 229 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 MS4A6AQ9H2W1 248 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 UQCC1Q9NVA1 299 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 FBXL17Q9UF56 701 aa11.01□□□□□ -0.65
CDC42BPB-209ENST00000634889 IGKV3-7A0A075B6H7 116 aa11□□□□□ -0.65
CDC42BPB-209ENST00000634889 DNASE2O00115 360 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-209ENST00000634889 CXCL3P19876 107 aa11□□□□□ -0.65
CDC42BPB-209ENST00000634889 PLP1P60201 277 aa11□□□□□ -0.65
CDC42BPB-209ENST00000634889 ATP6V1FQ16864 119 aa11□□□□□ -0.65
CDC42BPB-209ENST00000634889 ODF3L2Q3SX64 289 aa11□□□□□ -0.65
CDC42BPB-209ENST00000634889 DEFB125Q8N687 156 aa11□□□□□ -0.65
CDC42BPB-209ENST00000634889 OR11H7Q8NGC8 314 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms