RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 ZNF90Q03938 601 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 SCGB2B2Q4G0G5 96 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 SELENOHQ8IZQ5 122 aaKnown RBP9.08□□□□□ -0.96
LINC00339-206ENST00000634451 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 GLYATL2Q8WU03 294 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
LINC00339-206ENST00000634451 ZNF486Q96H40 463 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-206ENST00000634451 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-206ENST00000634451 Q9H521 79 aa9.08□□□□□ -0.96
LINC00339-206ENST00000634451 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 HERC1Q15751 4861 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 IGKV1D-37A0A075B6S9 117 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 SMIM31A0A1B0GVY4 71 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 CEBPZOSA8MTT3 80 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 SLC25A4P12235 298 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 RORCP51449 518 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 AP2S1P53680 142 aaPredicted RBP9.07□□□□□ -0.96
LINC00339-206ENST00000634451 ZNF79Q15937 498 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 ARRDC1Q8N5I2 433 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 RNF125Q96EQ8 232 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 ABHD1Q96SE0 405 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 TMEM222Q9H0R3 208 aa9.07□□□□□ -0.96
LINC00339-206ENST00000634451 FAM25AB3EWG3 89 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 FAM25CB3EWG5 89 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 FAM25GB3EWG6 89 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 CDS2O95674 445 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 FCN2Q15485 313 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 TMEM268Q5VZI3 342 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 FOXI2Q6ZQN5 318 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 OR52E5Q8NH55 327 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 TERB2Q8NHR7 220 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 RNASEH2CQ8TDP1 164 aaKnown RBP9.06□□□□□ -0.96
LINC00339-206ENST00000634451 FUNDC2Q9BWH2 189 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 NAA50Q9GZZ1 169 aaKnown RBP9.06□□□□□ -0.96
LINC00339-206ENST00000634451 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.06□□□□□ -0.96
LINC00339-206ENST00000634451 MTFP1Q9UDX5 166 aa9.06□□□□□ -0.96
LINC00339-206ENST00000634451 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 ZNF705GA8MUZ8 300 aaPredicted RBP9.05□□□□□ -0.96
LINC00339-206ENST00000634451 SCGB2A1O75556 95 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 ATG12O94817 140 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 OR2F1Q13607 317 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 RNF212Q495C1 297 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 NMSQ5H8A3 153 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 CCDC71LQ8N9Z2 235 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 NAA60Q9H7X0 242 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
LINC00339-206ENST00000634451 EXTL2Q9UBQ6 330 aa9.05□□□□□ -0.96
LINC00339-206ENST00000634451 TEX13DA0A0J9YY54 714 aaPredicted RBP9.04□□□□□ -0.96
LINC00339-206ENST00000634451 RAB3DO95716 219 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 HBE1P02100 147 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 LYZP61626 148 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 DAD1P61803 113 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 PSG9Q00887 426 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 ZNRF2Q8NHG8 242 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 COQ8AQ8NI60 647 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 RBPMSQ93062 196 aaKnown RBP9.04□□□□□ -0.96
LINC00339-206ENST00000634451 FAM210BQ96KR6 192 aa9.04□□□□□ -0.96
LINC00339-206ENST00000634451 C7orf50Q9BRJ6 194 aaKnown RBP9.04□□□□□ -0.96
LINC00339-206ENST00000634451 A0A0J9YX75 114 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 M0R2Z0 102 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 GSTZ1O43708 216 aaPredicted RBP9.03□□□□□ -0.96
LINC00339-206ENST00000634451 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 PSMB3P49720 205 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 GAMTQ14353 236 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 ZFAND1Q8TCF1 268 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 KRTAP1-5Q9BYS1 174 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 MIXL1Q9H2W2 232 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 GOLT1BQ9Y3E0 138 aa9.03□□□□□ -0.96
LINC00339-206ENST00000634451 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-206ENST00000634451 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 AZU1P20160 251 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 PAX9P55771 341 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 KLF9Q13886 244 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-206ENST00000634451 OXA1LQ15070 435 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 RRN3P1Q2M238 152 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 STEAP1BQ6NZ63 245 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 FAM219AQ8IW50 185 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 BAP18Q8IXM2 172 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 TMEM229BQ8NBD8 167 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 SLC25A32Q9H2D1 315 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 RBKSQ9H477 322 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 TMED3Q9Y3Q3 217 aa9.02□□□□□ -0.97
LINC00339-206ENST00000634451 CRYM-AS1A6NIL9 109 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 ZFP92A6NM28 416 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 TNFAIP8O95379 198 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 NUDT3O95989 172 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 TAS2R19P59542 299 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
LINC00339-206ENST00000634451 SPINK13Q1W4C9 94 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms