RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 ATP5IP56385 69 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 PSMG4Q5JS54 123 aa9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 SOSTQ9BQB4 213 aa9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 NRN1Q9NPD7 142 aa9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 RSL24D1Q9UHA3 163 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 SHPKQ9UHJ6 478 aa9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 TBC1D24Q9ULP9 559 aa9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 TRAV10A0A0B4J240 114 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 RD3LP0DJH9 198 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 HLA-DMBP28068 263 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 NUP62P37198 522 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 TMBIM6P55061 237 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 SNRPD3P62318 126 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 PRR20EP86478 221 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 PRR20CP86479 221 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 PRR20DP86480 221 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 PRR20BP86481 221 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 PRR20AP86496 221 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 SMCO1Q147U7 214 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 SIGLEC15Q6ZMC9 328 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 DTD1Q8TEA8 209 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 ACY3Q96HD9 319 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
SOX2-OT-247ENST00000628347 DYNC1H1Q14204 4646 aaKnown RBP9□□□□□ -0.97
SOX2-OT-247ENST00000628347 PIGBOS1A0A0B4J2F0 54 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 IGLL5B9A064 214 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 IFNA10P01566 189 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 PSG1P11464 419 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 GPX4P36969 197 aaPredicted RBP9□□□□□ -0.97
SOX2-OT-247ENST00000628347 NKX2-1P43699 371 aaPredicted RBP9□□□□□ -0.97
SOX2-OT-247ENST00000628347 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
SOX2-OT-247ENST00000628347 SRPXP78539 464 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 OR8G2PQ6IF36 304 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 LYZL2Q7Z4W2 148 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 LGI3Q8N145 548 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 OR51G1Q8NGK1 321 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 RBKSQ9H477 322 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 DNAH11Q96DT5 4516 aa9□□□□□ -0.97
SOX2-OT-247ENST00000628347 DUXBA0A1W2PPF3 345 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 H3BMM0 161 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 ANXA3P12429 323 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 KLF9Q13886 244 aaPredicted RBP8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 Q6ZTC4 211 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 RNF125Q96EQ8 232 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 RNF126Q9BV68 326 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 SLIRPQ9GZT3 109 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 CLEC5AQ9NY25 188 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 PRR13Q9NZ81 148 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 PFDN2Q9UHV9 154 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
SOX2-OT-247ENST00000628347 IGKV1D-37A0A075B6S9 117 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 PITX3O75364 302 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 AKR1C4P17516 323 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 GAMTQ14353 236 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 CENPSQ8N2Z9 138 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 CLUHP3Q96NS8 147 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 NEU1Q99519 415 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 MCUBQ9NWR8 336 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
SOX2-OT-247ENST00000628347 IGHV4-4A0A075B6R2 117 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 FABP12A6NFH5 140 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 AMBPP02760 352 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 TNFSF8P32971 234 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 C12orf74Q32Q52 190 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 C1orf194Q5T5A4 169 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 LRTM2Q8N967 370 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 OR1S1Q8NH92 325 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 SLC35E1Q96K37 410 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
SOX2-OT-247ENST00000628347 ZFP92A6NM28 416 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 SOCS3O14543 225 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 FABP1P07148 127 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 SLC25A6P12236 298 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 FAUP35544 74 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF90Q03938 601 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 TMEM128Q5BJH2 165 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 LCE2AQ5TA79 106 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF705AQ6ZN79 300 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 TRGV9Q99603 122 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 PBDC1Q9BVG4 233 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 SAV1Q9H4B6 383 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 XCL2Q9UBD3 114 aa8.96□□□□□ -0.98
SOX2-OT-247ENST00000628347 SMIM9A6NGZ8 99 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF705FA8MVS1 300 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 H3BMQ9 156 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 NOL3O60936 208 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF705DP0CH99 300 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF705BP0CI00 300 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 ID1P41134 155 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 PSMB3P49720 205 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 AP3S2P59780 193 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 RAB11AP62491 216 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 SPATA31B1PQ5VZV4 182 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 THAP8Q8NA92 274 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 DEDD2Q8WXF8 326 aa8.95□□□□□ -0.98
SOX2-OT-247ENST00000628347 TRIM63Q969Q1 353 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms