RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PEA15Q15121 130 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 KLK9Q2XQG4 91 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 SLC35E3Q7Z769 313 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 OR4F5Q8NH21 305 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 KLK9Q9UKQ9 250 aa7.42□□□□□ -1.22
PDLIM5-223ENST00000627587 TRAV41A0A0B4J266 112 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 RBFOX3A6NFN3 312 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 G3V318 75 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 CLN5O75503 358 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 OR2J3O76001 311 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 IGHG2P01859 326 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 CRYBA1P05813 215 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 NPBWR1P48145 328 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 CRIP2P52943 208 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 BLCAPP62952 87 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 DEFA5Q01523 94 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 Q6YL49 198 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 TMEM86BQ8N661 226 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 DUX5Q96PT3 197 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 RARRES2Q99969 163 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 SEPSECSQ9HD40 501 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 ZNF355PQ9NSJ1 428 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 GNG13Q9P2W3 67 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 TMEM218A2RU14 115 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 IFNA1P01562 189 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 IGF1P05019 195 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 IGLC1P0CG04 106 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 MFAP4P55083 255 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 RPL15P61313 204 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 HAGHQ16775 308 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 FAM78BQ5VT40 261 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 SPATA31B1PQ5VZV4 182 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 OR1L4Q8NGR5 311 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 GATAD1Q8WUU5 269 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 PFDN5Q99471 154 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 SMDT1Q9H4I9 107 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 FBXL7Q9UJT9 491 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 VPREB3Q9UKI3 123 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 PRELID1Q9Y255 219 aa7.41□□□□□ -1.22
PDLIM5-223ENST00000627587 TRAV30A0A087WSZ9 112 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 M0QZ24 198 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 GNG7O60262 68 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 COX7A2P2O60397 106 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 NDUFA7O95182 113 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 IGKV1-17P01599 117 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 FABP1P07148 127 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 STAG3L2P0CL84 134 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 STAG3L3P0CL85 134 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 PMS2P11Q13670 270 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 MORN5Q5VZ52 161 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 ZNF414Q96IQ9 312 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 RNF2Q99496 336 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 TMPRSS5Q9H3S3 457 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 C21orf62Q9NYP8 219 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 LINC00527Q9UJ94 153 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 FUT9Q9Y231 359 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 S4R3C0 116 aa7.4□□□□□ -1.23
PDLIM5-223ENST00000627587 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 TRBV9A0A0B4J1U6 114 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 F8W036 122 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 AP4M1O00189 453 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 HOXA3O43365 443 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 SCGB2A1O75556 95 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 NDUFB8O95169 186 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 CXorf1O96002 111 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 OR5G3P0C626 314 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 SFTA3P0C7M3 94 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 BCL2P10415 239 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 PSMB3P49720 205 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 PPT1P50897 306 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 RHOGP84095 191 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 Q56UQ5 140 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 KHDC3LQ587J8 217 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 ZNF506Q5JVG8 444 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 C10orf91Q5T1B1 145 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 PATE2Q6UY27 113 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 MRPL32Q9BYC8 188 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 DNAJC4Q9NNZ3 241 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 MANBALQ9NQG1 85 aa7.39□□□□□ -1.23
PDLIM5-223ENST00000627587 LOC102723971A0A1B0GUV8 181 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 CLPSL1A2RUU4 121 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 HSPB1P04792 205 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 ARL14EPLP0DKL9 152 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 PSG1P11464 419 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 TAGLN2P37802 199 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 TAS2R45P59539 299 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 ICAM4Q14773 271 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 C15orf32Q32M92 178 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 TIGITQ495A1 244 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 C10orf113Q5VZT2 155 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 MIR17HGQ75NE6 70 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 SUN5Q8TC36 379 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 TXN2Q99757 166 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 SEC11CQ9BY50 192 aa7.38□□□□□ -1.23
PDLIM5-223ENST00000627587 TECRQ9NZ01 308 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms