RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ANKRD34BA5PLL1 514 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 F8W735 103 aaPredicted RBP5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 CLDN34H7C241 214 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 IGKV1-17P01599 117 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 IGLV1-40P01703 118 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 TRGV3P03979 118 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 CD5P06127 495 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 C8orf88P0DMB2 117 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 PSG1P11464 419 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 SRD5A1P18405 259 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 ZP3P21754 424 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 S100A7P31151 101 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 FGF8P55075 233 aaPredicted RBP5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 TPPP2P59282 170 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 RPL15P61313 204 aaKnown RBP5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 SLC35B1P78383 322 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 CCL20P78556 96 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 CFHR3Q02985 330 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 KHDC3LQ587J8 217 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 ZNF506Q5JVG8 444 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 FAM209BQ5JX69 171 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 FAM78BQ5VT40 261 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 PQLC2Q6ZP29 291 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 Q8N2B8 174 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 OR51G1Q8NGK1 321 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 OR1B1Q8NGR6 318 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 ZNF502Q8TBZ5 544 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 ZNF418Q8TF45 676 aaPredicted RBP5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 Q8WTZ3 238 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 NARS2Q96I59 477 aaKnown RBP5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 NOL4LQ96MY1 436 aaPredicted RBP5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 MS4A10Q96PG2 267 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 ZNF702PQ9H963 129 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 SEPSECSQ9HD40 501 aaKnown RBP5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 GNG13Q9P2W3 67 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 LINC00527Q9UJ94 153 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 RNF24Q9Y225 148 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.87□□□□□ -1.476e-8■■■■■ 52.8
PTP4A1-206ENST00000627002 MTORP42345 2549 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 LOC102723971A0A1B0GUV8 181 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 WI2-2373I1.2A0A1W2PRP0 233 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 TMEM218A2RU14 115 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 FAM181BA6NEQ2 426 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 OR2T8A6NH00 312 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 DNAJC9-AS1A6NH13 148 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 HMGB3O15347 200 aaKnown RBP5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 NDUFS6O75380 124 aaKnown RBP5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 OR2C1O95371 312 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 LY6G6DO95868 133 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 IGHG4P01861 327 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 HSPB1P04792 205 aaKnown RBP5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 ARL14EPLP0DKL9 152 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 BCL2P10415 239 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 ORM2P19652 201 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 LYZP61626 148 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 RELQ04864 619 aaPredicted RBP5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 HAGHQ16775 308 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 ZNF600Q6ZNG1 722 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 Q6ZS46 218 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 MIR17HGQ75NE6 70 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 IQCF2Q8IXL9 164 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 STXBP6Q8NFX7 210 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 SPATA3Q8NHX4 192 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 TMEM37Q8WXS4 190 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 SLC35B3Q9H1N7 401 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 TMEM231Q9H6L2 316 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 TMEM167BQ9NRX6 74 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 DOK5Q9P104 306 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 VAX2Q9UIW0 290 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 HIGD1AQ9Y241 93 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 S4R3C0 116 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 ARL2-SNX15V9GYD0 113 aa5.87□□□□□ -1.47
PTP4A1-206ENST00000627002 NAV3Q8IVL0 2385 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 AKAP9Q99996 3911 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 TGOLN2O43493 480 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 OR7C2O60412 319 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 IGHV3-23P01764 117 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 IL4P05112 153 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 CLEC3BP05452 202 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 ELANEP08246 267 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 CTSGP08311 255 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 PF4V1P10720 104 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 GCHFRP30047 84 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 GPR183P32249 361 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 RAB9AP51151 201 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 DEFA5Q01523 94 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 FOXE3Q13461 319 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 ICAM4Q14773 271 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 SPATA31B1PQ5VZV4 182 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 TEX38Q6PEX7 206 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 PATE2Q6UY27 113 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 Q71RC1 249 aaPredicted RBP5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 LINC00305Q7Z4B0 112 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 ZNF491Q8N8L2 437 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 SUN5Q8TC36 379 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 RNF125Q96EQ8 232 aa5.86□□□□□ -1.47
PTP4A1-206ENST00000627002 CCDC140Q96MF4 163 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms